RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 ZDHHC11Q9H8X9 412 aa13.02□□□□□ -0.33
SMARCA4-206ENST00000538456 Q9UFV3 132 aa13.02□□□□□ -0.33
SMARCA4-206ENST00000538456 YARS2Q9Y2Z4 477 aaKnown RBP13.02□□□□□ -0.33
SMARCA4-206ENST00000538456 MAD1L1Q9Y6D9 718 aa13.02□□□□□ -0.33
SMARCA4-206ENST00000538456 TMEM200CA6NKL6 621 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SDR42E2A6NKP2 422 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 GUCA1CO95843 209 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 DNASE1P24855 282 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SOX3P41225 446 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 MAGEA5P43359 124 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SCTRP47872 440 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 TERF2Q15554 542 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 HSP90AA5PQ58FG0 334 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 XKR6Q5GH73 641 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 TOR1AIP1Q5JTV8 583 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 ARMC3Q5W041 872 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 DUPD1Q68J44 220 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 RTL6Q6ICC9 239 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 ARSKQ6UWY0 536 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 KIAA0408Q6ZU52 694 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC22A16Q86VW1 577 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 ANKRD53Q8N9V6 530 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 OR56A3Q8NH54 315 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 CALML6Q8TD86 181 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC5A11Q8WWX8 675 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 SLCO2A1Q92959 643 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 IARS2Q9NSE4 1012 aaKnown RBP13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 TAS2R13Q9NYV9 303 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 ZKSCAN5Q9Y2L8 839 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 ARHGAP21Q5T5U3 1957 aa13.01□□□□□ -0.33
SMARCA4-206ENST00000538456 A0A0G2JN53 185 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 MAGEB16A2A368 324 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 OR14I1A6ND48 311 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 URADA6NGE7 173 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 TGFBR3LH3BV60 316 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 WWP2O00308 870 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 BCKDKO14874 412 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM155BO75949 473 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 ZFAND5O76080 213 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 CELA3AP09093 270 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 DEKP35659 375 aaKnown RBP13□□□□□ -0.33
SMARCA4-206ENST00000538456 AHRP35869 848 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 ADH7P40394 386 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 MAGEA6P43360 314 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 KIR2DL3P43628 341 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 DGKQP52824 942 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 PGGT1BP53609 377 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 CDKN2DP55273 166 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 BTN3A2P78410 334 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 REEP5Q00765 189 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC13A2Q13183 592 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 RBBP5Q15291 538 aaKnown RBP13□□□□□ -0.33
SMARCA4-206ENST00000538456 RBM20Q5T481 1227 aaKnown RBP13□□□□□ -0.33
SMARCA4-206ENST00000538456 GK5Q6ZS86 529 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 TMPRSS11BQ86T26 416 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 LMNTD2Q8IXW0 634 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 AGGF1Q8N302 714 aaeCLIP13□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM47BQ8NA70 645 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 TRPV3Q8NET8 790 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 SERPINB12Q96P63 405 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM167BQ9BTA0 163 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 CNPPD1Q9BV87 410 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 DLL4Q9NR61 685 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 ALKBH4Q9NXW9 302 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 MMACHCQ9Y4U1 282 aa13□□□□□ -0.33
SMARCA4-206ENST00000538456 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 A0A1B0GTL3 188 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 ATP6AP2A0A1C7CYW4 349 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 PROM1O43490 865 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 ATP6AP2O75787 350 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 GLSO94925 669 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 MLNP12872 115 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 SAT1P21673 171 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 UQCRC1P31930 480 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 HNRNPFP52597 415 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 ZNF750Q32MQ0 723 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 SLC25A35Q3KQZ1 300 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 NDUFAF5Q5TEU4 345 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 RGS9BPQ6ZS82 235 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 Q71RC1 249 aaPredicted RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 TRILQ7L0X0 811 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 CLNKQ7Z7G1 428 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 SCUBE1Q8IWY4 988 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 GPALPP1Q8IXQ4 340 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM109AQ8N4B1 249 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 TMEM251Q8N6I4 163 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 TMEM52Q8NDY8 209 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 MAIP1Q8WWC4 291 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 RASL10BQ96S79 203 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 FAM173AQ9BQD7 235 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 AICDAQ9GZX7 198 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 CLK4Q9HAZ1 481 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 XAB2Q9HCS7 855 aaKnown RBP12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 PRTFDC1Q9NRG1 225 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 RASSF1Q9NS23 344 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 CRIM1Q9NZV1 1036 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 MYOTQ9UBF9 498 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 ACAD8Q9UKU7 415 aa12.99□□□□□ -0.33
SMARCA4-206ENST00000538456 PPIEQ9UNP9 301 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms