RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 SLCO5A1Q9H2Y9 848 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 HAUS4Q9H6D7 363 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 ZNF703Q9H7S9 590 aaPredicted RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 ZFP64Q9NPA5 681 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 PRDM9Q9NQV7 894 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 NLE1Q9NVX2 485 aaPredicted RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 PACSIN3Q9UKS6 424 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 ATG4BQ9Y4P1 393 aa8.43□□□□□ -1.06
USP28-205ENST00000537706 ANK3Q12955 4377 aaKnown RBP8.43□□□□□ -1.06
USP28-205ENST00000537706 GRID2IPA4D2P6 1211 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 C3orf70A6NLC5 250 aaPredicted RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 HS3ST1O14792 307 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 MYO1DO94832 1006 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 PRSS56P0CW18 603 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 CHRM3P20309 590 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ACVR1BP36896 505 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 VLDLRP98155 873 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 WASHC5Q12768 1159 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 HYAL2Q12891 473 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ARHGAP19Q14CB8 494 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ANKRD20A4Q4UJ75 823 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ANKRD20A2Q5SQ80 823 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 THEMIS2Q5TEJ8 643 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ANKRD20A1Q5TYW2 823 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ANKRD20A3Q5VUR7 823 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 PIANPQ8IYJ0 282 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ZNF567Q8N184 647 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 APCDD1LQ8NCL9 501 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 STYXQ8WUJ0 223 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 NCLNQ969V3 563 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 RASL10BQ96S79 203 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 TIMP4Q99727 224 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 APOL2Q9BQE5 337 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SLC39A3Q9BRY0 314 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 PRDM14Q9GZV8 571 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ISCUQ9H1K1 167 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 NHEJ1Q9H9Q4 299 aaPredicted RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 LAMP3Q9UQV4 416 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SLC22A7Q9Y694 548 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 TCRBV16S1A1N1A0A5B0 115 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SYNDIG1LA6NDD5 238 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 LRRC53A6NM62 1247 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 EFCAB8A8MWE9 144 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 MATN4O95460 622 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SLC35G6P0C7Q6 338 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 CYP4B1P13584 511 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 GDF1P27539 372 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 CD79BP40259 229 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 RPL21P46778 160 aaKnown RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 DSCR9P59020 149 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 DYNLT1P63172 113 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 ACTG1P63261 375 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 CRYZQ08257 329 aaKnown RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 DUSP8Q13202 625 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SLC22A10Q63ZE4 541 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 RANBP10Q6VN20 620 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 DEPDC4Q8N2C3 294 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 OR9A1PQ8NGU1 263 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 GABPB2Q8TAK5 448 aaPredicted RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 RAPGEF5Q92565 580 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 CDKN2AIPNLQ96HQ2 116 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 JSRP1Q96MG2 331 aaPredicted RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 HS3ST6Q96QI5 342 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 PANX3Q96QZ0 392 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 TNFRSF13CQ96RJ3 184 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 NAPGQ99747 312 aaPredicted RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 TSGA10Q9BZW7 698 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 PHACTR1Q9C0D0 580 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 AIPL1Q9NZN9 384 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 MYOTQ9UBF9 498 aa8.42□□□□□ -1.06
USP28-205ENST00000537706 SNRNP200O75643 2136 aaKnown RBP8.42□□□□□ -1.06
USP28-205ENST00000537706 DNAJC13O75165 2243 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 CTAGE9A4FU28 777 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 ZNF860A6NHJ4 632 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 A8MXE2 369 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 WWP2O00308 870 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 MSTNO14793 375 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 CHST10O43529 356 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 EIF3BP55884 814 aaKnown RBP8.41□□□□□ -1.06
USP28-205ENST00000537706 KLHL30Q0D2K2 578 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 TFDP2Q14188 446 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 ABHD17CQ6PCB6 329 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 KIAA1328Q86T90 577 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 ASPGQ86U10 573 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 PLD3Q8IV08 490 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 SLC35F6Q8N357 371 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 OR5L2Q8NGL0 311 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 ZC3HAV1LQ96H79 300 aaKnown RBP8.41□□□□□ -1.06
USP28-205ENST00000537706 SCYL1Q96KG9 808 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 TBL1YQ9BQ87 522 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 GBA3Q9H227 469 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 CLK4Q9HAZ1 481 aaKnown RBP8.41□□□□□ -1.06
USP28-205ENST00000537706 SH2D2AQ9NP31 389 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 PNO1Q9NRX1 252 aaKnown RBP8.41□□□□□ -1.06
USP28-205ENST00000537706 FAM114A2Q9NRY5 505 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 TMEM184CQ9NVA4 438 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 INTUQ9ULD6 942 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 KCNE1BA0A087WTH5 132 aa8.41□□□□□ -1.06
USP28-205ENST00000537706 IGKV1-8A0A0C4DH67 115 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms