RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 MRPS30Q9NP92 439 aaKnown RBP16.65■□□□□ 0.26
SNX17-210ENST00000537606 PCDHGA8Q9Y5G5 932 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 SHISA7A6NL88 538 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 TMPRSS11DO60235 418 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 OPN1SWP03999 348 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 GABRG2P18507 467 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 PEBP1P30086 187 aaKnown RBP16.65■□□□□ 0.26
SNX17-210ENST00000537606 VLDLRP98155 873 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 GALNT5Q7Z7M9 940 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 RNF130Q86XS8 419 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 CLVS1Q8IUQ0 354 aaPredicted RBP16.65■□□□□ 0.26
SNX17-210ENST00000537606 OR5K1Q8NHB7 308 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 SCARF2Q96GP6 870 aaPredicted RBP16.65■□□□□ 0.26
SNX17-210ENST00000537606 C17orf62Q9BQA9 187 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 AICDAQ9GZX7 198 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 C8orf33Q9H7E9 229 aaPredicted RBP16.65■□□□□ 0.26
SNX17-210ENST00000537606 POLR1BQ9H9Y6 1135 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 SLC6A20Q9NP91 592 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 SLAMF7Q9NQ25 335 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 TAS2R9Q9NYW1 312 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 EBF1Q9UH73 591 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 CDC14AQ9UNH5 594 aa16.65■□□□□ 0.26
SNX17-210ENST00000537606 MYO1GB0I1T2 1018 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 NDUFS4O43181 175 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 RASGRP1O95267 797 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 EEF1B2P24534 225 aaKnown RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 CHI3L1P36222 383 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 BCL6P41182 706 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 NEDD8Q15843 81 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 MEP1AQ16819 746 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 Q6ZS52 159 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 KCTD8Q6ZWB6 473 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 GPR141Q7Z602 305 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 SVOPLQ8N434 492 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 RBM4BQ9BQ04 359 aaKnown RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 DPH7Q9BTV6 452 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 RBM4Q9BWF3 364 aaKnown RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 ADNPQ9H2P0 1102 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 TTYH1Q9H313 450 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 SYNPO2LQ9H987 977 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 TEX10Q9NXF1 929 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 TMEFF2Q9UIK5 374 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 SNX11Q9Y5W9 270 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 CAPN5O15484 640 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 GCM2O75603 506 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 HPRP00739 348 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 ACTR1BP42025 376 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 ACTR1AP61163 376 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 NFATC4Q14934 902 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 GOT1L1Q8NHS2 421 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 CREB3L4Q8TEY5 395 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 TEFMQ96QE5 360 aaKnown RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 MVB12BQ9H7P6 319 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 IL1RAPQ9NPH3 570 aa16.64■□□□□ 0.25
SNX17-210ENST00000537606 TUBA8Q9NY65 449 aaPredicted RBP16.64■□□□□ 0.25
SNX17-210ENST00000537606 A0A1B0GVG6 124 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 ISM1B1AKI9 464 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 TMX2-CTNND1H3BSU7 103 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 HAT1O14929 419 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 IL1RNP18510 177 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 DDCP20711 480 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 RPL3P39023 403 aaKnown RBP16.63■□□□□ 0.25
SNX17-210ENST00000537606 MAGEA2P43356 314 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 CDK9P50750 372 aaKnown RBP16.63■□□□□ 0.25
SNX17-210ENST00000537606 IL1RL1Q01638 556 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 VEZF1Q14119 521 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 LRRC32Q14392 662 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 CTU2Q2VPK5 515 aaKnown RBP16.63■□□□□ 0.25
SNX17-210ENST00000537606 CBLL1Q75N03 491 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 THAP5Q7Z6K1 395 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 OR2L3Q8NG85 312 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 FAM3CQ92520 227 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 EXOSC8Q96B26 276 aaKnown RBP16.63■□□□□ 0.25
SNX17-210ENST00000537606 RGMAQ96B86 450 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 WDR92Q96MX6 357 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 CXorf36Q9H7Y0 433 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 RPS6KA6Q9UK32 745 aa16.63■□□□□ 0.25
SNX17-210ENST00000537606 PRKRAO75569 313 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 TRMUO75648 421 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 SEMA3DO95025 777 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 TNFRSF1BP20333 461 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 HNRNPA2B1P22626 353 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 PPIBP23284 216 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 TPD52P55327 224 aaPredicted RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 RPS26P62854 115 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 PIGFQ07326 219 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 CCINQ13939 588 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 CYP27C1Q4G0S4 372 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 EOGTQ5NDL2 527 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 KIAA1614Q5VZ46 1190 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 EIF3MQ7L2H7 374 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 CYP4Z1Q86W10 505 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 DCP2Q8IU60 420 aaKnown RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 C8orf59Q8N0T1 100 aaPredicted RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 ARL10Q8N8L6 244 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 PJA1Q8NG27 643 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 USE1Q9NZ43 259 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 ZNF624Q9P2J8 865 aaPredicted RBP16.62■□□□□ 0.25
SNX17-210ENST00000537606 CORO2BQ9UQ03 480 aa16.62■□□□□ 0.25
SNX17-210ENST00000537606 LRIT2A6NDA9 550 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms