RNA–Protein interactions for RNA: ENST00000537435.2

USP44-203, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-203ENST00000537435 RPL3P39023 403 aaKnown RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 WDR5P61964 334 aaKnown RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 CYP4F2P78329 520 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 TEKQ02763 1124 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 ZNF630Q2M218 657 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 DEFB115Q30KQ5 88 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 SOWAHCQ53LP3 525 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 C10orf62Q5T681 223 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 METTL4Q8N3J2 472 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 OR9A1PQ8NGU1 263 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 SLC5A11Q8WWX8 675 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 FAM129BQ96TA1 746 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 PIP5K1AQ99755 562 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 OR51E2Q9H255 320 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 RNF167Q9H6Y7 350 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 SCHIP1Q9P0W5 487 aaPredicted RBP13.7□□□□□ -0.22
USP44-203ENST00000537435 ZNF229Q9UJW7 825 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 TBX21Q9UL17 535 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 RAB23Q9ULC3 237 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 TRIM17Q9Y577 477 aa13.7□□□□□ -0.22
USP44-203ENST00000537435 CARNS1A5YM72 827 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 A8MVJ9 347 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 DSCR3O14972 297 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 AQP9O43315 295 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 UPK1BO75841 260 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 GADD45GO95257 159 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 IFNA14P01570 189 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 IL3P08700 152 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ARAFP10398 606 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 LIMS1P48059 325 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TAP2Q03519 686 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ARMCX4Q5H9R4 360 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 NXPE4Q6UWF7 544 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TRMT11Q7Z4G4 463 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 MMP21Q8N119 569 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 AMER2Q8N7J2 671 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ZNF740Q8NDX6 193 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ZNF296Q8WUU4 475 aaPredicted RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 RAD9AQ99638 391 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 OR2AG1Q9H205 316 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TMEM39AQ9NV64 488 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 MS4A12Q9NXJ0 267 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 OGDHLQ9ULD0 1010 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ANGPT4Q9Y264 503 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 HCN4Q9Y3Q4 1203 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 FAM32AQ9Y421 112 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 PCM1Q15154 2024 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 AGAP5A6NIR3 686 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 KPNA3O00505 521 aaPredicted RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 LILRB5O75023 590 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 CNOT3O75175 753 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 CCNB2O95067 398 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 SOD1P00441 154 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 HSMCR30P0CW71 290 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 IRS1P35568 1242 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 CRISP3P54108 245 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 PCBP3P57721 371 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 SLC13A2Q13183 592 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 PTGES3Q15185 160 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 FBXO43Q4G163 708 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 FAM180BQ6P0A1 224 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ARMC8Q8IUR7 673 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 LYSMD2Q8IV50 215 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 LRRC56Q8IYG6 542 aaPredicted RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 NRSN1Q8IZ57 195 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 DTD2Q96FN9 168 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TOX2Q96NM4 488 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 SORBS1Q9BX66 1292 aaKnown RBP13.69□□□□□ -0.22
USP44-203ENST00000537435 EPHX3Q9H6B9 360 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TAS2R16Q9NYV7 291 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 RHCGQ9UBD6 479 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ATP11BQ9Y2G3 1177 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 ENPP4Q9Y6X5 453 aa13.69□□□□□ -0.22
USP44-203ENST00000537435 TRBC2A0A5B9 178 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 K7ESM1 405 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 KDM1AO60341 852 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 KRT75O95678 551 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 HMGA2P52926 109 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 METAP1P53582 386 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 EIF4HQ15056 248 aaKnown RBP13.68□□□□□ -0.22
USP44-203ENST00000537435 ZNF77Q15935 545 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 BCL7AQ4VC05 210 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 NLGN4XQ8N0W4 816 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 AQP11Q8NBQ7 271 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 B3GNT7Q8NFL0 401 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 HPS1Q92902 700 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 LRIG1Q96JA1 1093 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CDADC1Q9BWV3 514 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 SLC6A16Q9GZN6 736 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 TBC1D14Q9P2M4 693 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 PCDHGA3Q9Y5H0 932 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 HCFC2Q9Y5Z7 792 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CFAP20Q9Y6A4 193 aaKnown RBP13.68□□□□□ -0.22
USP44-203ENST00000537435 LAMA2P24043 3122 aaKnown RBP13.68□□□□□ -0.22
USP44-203ENST00000537435 TAF4O00268 1085 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 TBX1O43435 398 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 FKTNO75072 461 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CBLP22681 906 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 RGS6P49758 472 aa13.68□□□□□ -0.22
USP44-203ENST00000537435 CDC42P60953 191 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms