RNA–Protein interactions for RNA: ENST00000536717.5

TNFRSF1A-209, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,503 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-209ENST00000536717 EMCNQ9ULC0 261 aa16.82■□□□□ 0.28
TNFRSF1A-209ENST00000536717 VPS4AQ9UN37 437 aa16.82■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PCDHGA10Q9Y5H3 936 aa16.82■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ICE1Q9Y2F5 2266 aa16.82■□□□□ 0.28
TNFRSF1A-209ENST00000536717 URADA6NGE7 173 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PLIN3O60664 434 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 H2AFYO75367 372 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SEC24DO94855 1032 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TBX6O95947 436 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PROCP04070 461 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 FHP07954 510 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 GNLYP22749 145 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MAGOHP61326 146 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SETDB1Q15047 1291 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TOR1AIP1Q5JTV8 583 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CISD2Q8N5K1 135 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TTLQ8NG68 377 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 DNAJB14Q8TBM8 379 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 RDH11Q8TC12 318 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TCP10LQ8TDR4 215 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TSLPQ969D9 159 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TBC1D20Q96BZ9 403 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TLCD1Q96CP7 247 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SH3GL2Q99962 352 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 NT5DC2Q9H857 520 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ASF1BQ9NVP2 202 aa16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 C19orf25Q9UFG5 118 aaPredicted RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TNPO3Q9Y5L0 923 aaKnown RBP16.81■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TCP11X1B4DZS4 312 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TYROBPO43914 113 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CCNT2O60583 730 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SBK3P0C264 359 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MYL2P10916 166 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CD22P20273 847 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 HNRNPH1P31943 449 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 AGTR2P50052 363 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ABRAXAS2Q15018 415 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PDK4Q16654 411 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 B3GNTL1Q67FW5 361 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ADNP2Q6IQ32 1131 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 VN1R5Q7Z5H4 357 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 KRT78Q8N1N4 520 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PTGR2Q8N8N7 351 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 UBTD2Q8WUN7 234 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ARL8AQ96BM9 186 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PHF21BQ96EK2 531 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 WDR34Q96EX3 536 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CD244Q9BZW8 370 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PITHD1Q9GZP4 211 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 KCNK9Q9NPC2 374 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ZNF490Q9ULM2 529 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 NTNG1Q9Y2I2 539 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 USP9YO00507 2555 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 LRIT2A6NDA9 550 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 STX16-NPEPL1H3BU86 382 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 STX16O14662 325 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CLGNO14967 610 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ATP8B1O43520 1251 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ICAM2P13598 275 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ATP5F1P24539 256 aaPredicted RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 GSTM2P28161 218 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 UBAP2LQ14157 1087 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 DOC2AQ14183 400 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 E2F2Q14209 437 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 NSDHLQ15738 373 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PLAG1Q6DJT9 500 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 LRRC70Q7Z2Q7 622 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SLC22A9Q8IVM8 553 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SNX31Q8N9S9 440 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CATSPER1Q8NEC5 780 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ARMC2Q8NEN0 867 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 GAL3ST3Q96A11 431 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MS4A6EQ96DS6 147 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CCDC126Q96EE4 140 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 PTCD3Q96EY7 689 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SEC16BQ96JE7 1060 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CNDP1Q96KN2 507 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ATP6V1G3Q96LB4 118 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 FAM111AQ96PZ2 611 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 BARD1Q99728 777 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 C12orf65Q9H3J6 166 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CLK4Q9HAZ1 481 aaKnown RBP16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MAP10Q9P2G4 905 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 OPTCQ9UBM4 332 aa16.8■□□□□ 0.28
TNFRSF1A-209ENST00000536717 DIDO1Q9BTC0 2240 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 A8MT66 165 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 MAGEB17A8MXT2 336 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 TM9SF1O15321 606 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 DLX3O60479 287 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CLEC3AO75596 197 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 WFS1O76024 890 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 CPA3P15088 417 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 STXBP1P61764 594 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ZNF169Q14929 603 aaPredicted RBP16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 BTBD16Q32M84 506 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ADPRMQ3LIE5 342 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 SFT2D3Q587I9 215 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 XKR6Q5GH73 641 aa16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 METTL2BQ6P1Q9 378 aaKnown RBP16.79■□□□□ 0.28
TNFRSF1A-209ENST00000536717 ZYG11AQ6WRX3 759 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms