RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 CPSF6Q16630 551 aaKnown RBP eCLIP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 BTBD16Q32M84 506 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 LGSNQ5TDP6 509 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 IRAK1BP1Q5VVH5 260 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 FCRLBQ6BAA4 426 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 NIPAL1Q6NVV3 410 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 TRIM40Q6P9F5 258 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PAPD4Q6PIY7 484 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 ISLR2Q6UXK2 745 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 QSOX2Q6ZRP7 698 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 Q6ZS92 163 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 HPS6Q86YV9 775 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 ZADH2Q8N4Q0 377 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 CATSPER1Q8NEC5 780 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 CPT1CQ8TCG5 803 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 C19orf60Q96EN9 201 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 MAGEB10Q96LZ2 347 aaPredicted RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 MTERF1Q99551 399 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 CLK4Q9HAZ1 481 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 PRM3Q9NNZ6 103 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 DMRT3Q9NQL9 472 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 FETUBQ9UGM5 382 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 B3GNT3Q9Y2A9 372 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 TNPO3Q9Y5L0 923 aaKnown RBP12.36□□□□□ -0.43
PRKDC-206ENST00000536429 FLNCQ14315 2725 aa12.36□□□□□ -0.43
PRKDC-206ENST00000536429 IQANK1A0A1B0GTG1 560 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 MYOCOSA0A1B0GUC4 107 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 A8MUA0 341 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 CYR61O00622 381 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 B3GALT2O43825 422 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 MAN1A2O60476 641 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 RPS17P08708 135 aaKnown RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 JAK1P23458 1154 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 ATP5A1P25705 553 aaKnown RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 HSD17B3P37058 310 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 MTTPP55157 894 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 CDH13P55290 713 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 RAB38P57729 211 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 ACTN3Q08043 901 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 ZRSR2Q15696 482 aaKnown RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 INPP5JQ15735 1006 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 CRB2Q5IJ48 1285 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 KHDRBS2Q5VWX1 349 aaKnown RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 LIPJQ5W064 366 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 PLAG1Q6DJT9 500 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 RIPOR1Q6ZS17 1223 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 SH2D5Q6ZV89 423 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 SCUBE1Q8IWY4 988 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 L3MBTL4Q8NA19 623 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 OR2W6PQ8NHA6 318 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 WDR20Q8TBZ3 569 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 EPS8L3Q8TE67 593 aaKnown RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 UBE2E3Q969T4 207 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 CNDP1Q96KN2 507 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 SERINC2Q96SA4 455 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 NPAS2Q99743 824 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 MAPKAP1Q9BPZ7 522 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 NPLQ9BXD5 320 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 SLAMF7Q9NQ25 335 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 PRDM9Q9NQV7 894 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 KCMF1Q9P0J7 381 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 EMCNQ9ULC0 261 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 DAPP1Q9UN19 280 aa12.35□□□□□ -0.43
PRKDC-206ENST00000536429 RP1L1Q8IWN7 2480 aaPredicted RBP12.35□□□□□ -0.43
PRKDC-206ENST00000536429 TCRBV16S1A1N1A0A5B0 115 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 A8MUI8 341 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 H0YIV9 168 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 PLPP1O14494 284 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 DLX3O60479 287 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 KLHL41O60662 606 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 CLDN9O95484 217 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 CCNG1P51959 295 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 SLC26A5P58743 744 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 KCNC4Q03721 635 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 DEPDC1Q5TB30 811 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 METTL2BQ6P1Q9 378 aaKnown RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 CLNKQ7Z7G1 428 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 KIF2BQ8N4N8 673 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 CISD2Q8N5K1 135 aaKnown RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ACOT4Q8N9L9 421 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 DNAJB14Q8TBM8 379 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 PPP4R1Q8TF05 950 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF483Q8TF39 744 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 TM9SF4Q92544 642 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ATP6V1E2Q96A05 226 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 MTFMTQ96DP5 389 aaKnown RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 CMTM7Q96FZ5 175 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 KCNC2Q96PR1 638 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 LPAR4Q99677 370 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF717Q9BY31 904 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ILKAPQ9H0C8 392 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 C12orf65Q9H3J6 166 aaKnown RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 EPS8L2Q9H6S3 715 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 COPS7BQ9H9Q2 264 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 SEMA4BQ9NPR2 832 aaPredicted RBP12.34□□□□□ -0.43
PRKDC-206ENST00000536429 ZNF225Q9UK10 706 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 TMCO1Q9UM00 188 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 NTNG1Q9Y2I2 539 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 PCDHGA11Q9Y5H2 935 aa12.34□□□□□ -0.43
PRKDC-206ENST00000536429 PCDHGA10Q9Y5H3 936 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms