RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 LRIG1Q96JA1 1093 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 C1QTNF7Q9BXJ2 289 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 UCKL1Q9NWZ5 548 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 GPRC5BQ9NZH0 403 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CD84Q9UIB8 345 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 CORO2BQ9UQ03 480 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 ERVW-1Q9UQF0 538 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 HCN4Q9Y3Q4 1203 aa17.23■□□□□ 0.35
RAB40C-203ENST00000535977 TEX51A0A1B0GUA7 166 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 CATP04040 527 aaKnown RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 CYP4B1P13584 511 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 CDKN2CP42773 168 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 PNLIPRP1P54315 467 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 WDR5P61964 334 aaKnown RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 SIM2Q14190 667 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 IRF3Q14653 427 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 VMACQ2NL98 169 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ZNF284Q2VY69 593 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 XKR6Q5GH73 641 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 PRSS36Q5K4E3 855 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 GRHL2Q6ISB3 625 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 KIAA0907Q7Z7F0 614 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 CACTIN-AS1Q8N1I8 211 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 VPS37AQ8NEZ2 397 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ITPAQ9BY32 194 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ATG10Q9H0Y0 220 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 SPHK2Q9NRA0 654 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 TEKT2Q9UIF3 430 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 NUP50Q9UKX7 468 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 PEX16Q9Y5Y5 336 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 UPK3BL1B0FP48 263 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 UPK3BL2E5RIL1 263 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 PRAMEF4O60810 478 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 TRAPPC2P0DI81 140 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 TRAPPC2BP0DI82 140 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 CCL5P13501 91 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 IL32P24001 234 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ACSM2AQ08AH3 577 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 SOWAHCQ53LP3 525 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 HENMT1Q5T8I9 393 aaKnown RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 PRAMEF9Q5VWM5 478 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ACSM2BQ68CK6 577 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 OR2T5Q6IEZ7 315 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 SYCE2Q6PIF2 218 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 SERPINA13PQ6UXR4 307 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 HSD11B1LQ7Z5J1 315 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 TMCO2Q7Z6W1 182 aaPredicted RBP17.22■□□□□ 0.35
RAB40C-203ENST00000535977 OR2T29Q8NH02 315 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 ZFAND1Q8TCF1 268 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 BTN2A2Q8WVV5 523 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 TMEM159Q96B96 161 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 RNF6Q9Y252 685 aa17.22■□□□□ 0.35
RAB40C-203ENST00000535977 MAGEB17A8MXT2 336 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 LOC110117498-PIK3R3F6TDL0 507 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 SGTAO43765 313 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 FAM20BO75063 409 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 LRATO95237 230 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 COX7A2P14406 83 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 ENGP17813 658 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 VASPP50552 380 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 EPHA5P54756 1037 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 VEZF1Q14119 521 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 ADIPOR2Q86V24 386 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 CPA6Q8N4T0 437 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 FOPNLQ96NB1 174 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 C17orf62Q9BQA9 187 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 UCK2Q9BZX2 261 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 SMG9Q9H0W8 520 aaKnown RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 MBD1Q9UIS9 605 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP17.21■□□□□ 0.352e-6■■■□□ 15.6
RAB40C-203ENST00000535977 U3KQV3 271 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 HELZP42694 1942 aaKnown RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 DPM1O60762 260 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 ATG13O75143 517 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 PRKACAP17612 351 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 XPAP23025 273 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 EFR3AQ14156 821 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 SYTL3Q4VX76 610 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 C10orf62Q5T681 223 aaPredicted RBP17.21■□□□□ 0.35
RAB40C-203ENST00000535977 ANXA8L1Q5VT79 327 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 OTUB2Q96DC9 234 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 MMP28Q9H239 520 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 TDP1Q9NUW8 608 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 BTNL2Q9UIR0 455 aa17.21■□□□□ 0.35
RAB40C-203ENST00000535977 LOC100506127A0A0U1RQW1 187 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 PNMA8CA0A1B0GUJ8 204 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 OR6C70A6NIJ9 312 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 SLITRK5O94991 958 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 KCNK5O95279 499 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 CLTBP09497 229 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 PSKH1P11801 424 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 TYRP14679 529 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 DNAJA1P31689 397 aaKnown RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 GRK5P34947 590 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 UGT8Q16880 541 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 EIF3MQ7L2H7 374 aaKnown RBP17.2■□□□□ 0.34
RAB40C-203ENST00000535977 LRRC20Q8TCA0 184 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 DEDD2Q8WXF8 326 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 SCAMP4Q969E2 229 aa17.2■□□□□ 0.34
RAB40C-203ENST00000535977 TMCO6Q96DC7 493 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms