RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 PIWIL3Q7Z3Z3 882 aaKnown RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 HORMAD1Q86X24 394 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ELSPBP1Q96BH3 223 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 PPP1R14BQ96C90 147 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 F2RL3Q96RI0 385 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ASPSCR1Q9BZE9 553 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 SLC6A17Q9H1V8 727 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 RHBGQ9H310 441 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 OSGEPL1Q9H4B0 414 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 RIBC2Q9H4K1 309 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 TBCCD1Q9NVR7 557 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 TAS2R9Q9NYW1 312 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 TAAR2Q9P1P5 351 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 ENPP5Q9UJA9 477 aa12.78□□□□□ -0.36
VPS33B-202ENST00000535906 SAMHD1Q9Y3Z3 626 aaKnown RBP12.78□□□□□ -0.36
VPS33B-202ENST00000535906 A0A1W2PRB8 838 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 SUV39H1O43463 412 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 CLPXO76031 633 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 LAMP2P13473 410 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 HTR1BP28222 390 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 RPL3P39023 403 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 CLK3P49761 638 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 GP2P55259 537 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 DEPDC1Q5TB30 811 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 KHDRBS2Q5VWX1 349 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 SLC16A12Q6ZSM3 486 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ANKRD13BQ86YJ7 626 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ADGRF3Q8IZF5 1079 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 SMYD1Q8NB12 490 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ABHD11Q8NFV4 315 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 OR52N2Q8NGI0 321 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 MTERF3Q96E29 417 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 PLEKHA8Q96JA3 519 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 INSM2Q96T92 566 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 AIF1LQ9BQI0 150 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 RAD21L1Q9H4I0 556 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 PELI2Q9HAT8 420 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 WASH6PQ9NQA3 447 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 C1GALT1Q9NS00 363 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 FAIMQ9NVQ4 179 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ADPRHL2Q9NX46 363 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 RHBDL2Q9NX52 303 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 PDP1Q9P0J1 537 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 XPNPEP2O43895 674 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 INMTO95050 263 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 OPN1SWP03999 348 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 JUNDP17535 347 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 HSD17B2P37059 387 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ITGA1P56199 1179 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 RAB15P59190 212 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 CXCR4P61073 352 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 IL1RL1Q01638 556 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 EMX1Q04741 257 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 SIM2Q14190 667 aaPredicted RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 TEAD4Q15561 434 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 TBC1D25Q3MII6 688 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 TMEM184AQ6ZMB5 413 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 TSEN54Q7Z6J9 526 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 RNF130Q86XS8 419 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 SMPDL3AQ92484 453 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 C12orf66Q96MD2 445 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 FERD3LQ96RJ6 166 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 MYOCQ99972 504 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 DOHHQ9BU89 302 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 TRMT61BQ9BVS5 477 aaKnown RBP12.77□□□□□ -0.37
VPS33B-202ENST00000535906 MS4A8Q9BY19 250 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 CCDC90BQ9GZT6 254 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ABCG4Q9H172 646 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 PALMDQ9NP74 551 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 MIEF1Q9NQG6 463 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 FBXL12Q9NXK8 326 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 ACSL5Q9ULC5 683 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 KCNK6Q9Y257 313 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 PLEKHM1Q9Y4G2 1056 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 MAP4K5Q9Y4K4 846 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 DGKBQ9Y6T7 804 aa12.77□□□□□ -0.37
VPS33B-202ENST00000535906 F5P12259 2224 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 ZNF99A8MXY4 864 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 NDUFS2O75306 463 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 BCAS1O75363 584 aaPredicted RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 JRKO75564 520 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 CYP4B1P13584 511 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 BSGP35613 385 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 CCR8P51685 355 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 SELENOWP63302 87 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 AQP6Q13520 282 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 IKBIPQ70UQ0 350 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 B3GNT8Q7Z7M8 397 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GANCQ8TET4 914 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 FAR1Q8WVX9 515 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 TRUB1Q8WWH5 349 aaKnown RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 DUSP21Q9H596 190 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 THUMPD1Q9NXG2 353 aaKnown RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 TPRKBQ9Y3C4 175 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GPR89AB7ZAQ6 455 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 LCMT2O60294 686 aaKnown RBP12.76□□□□□ -0.37
VPS33B-202ENST00000535906 GPR89BP0CG08 455 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 ZNF12P17014 697 aa12.76□□□□□ -0.37
VPS33B-202ENST00000535906 TNFRSF1BP20333 461 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms