RNA–Protein interactions for RNA: ENST00000535181.5

CHFR-209, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-209ENST00000535181 TUBB8Q3ZCM7 444 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 ATP1A1-AS1Q5TC04 95 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 OR4C11Q6IEV9 310 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 ZNF793Q6ZN11 406 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 SHISA6Q6ZSJ9 500 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 PPP1R32Q7Z5V6 425 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 MRGPREQ86SM8 312 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 LAPTM4BQ86VI4 370 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 ZCCHC7Q8N3Z6 543 aaKnown RBP19.39■□□□□ 0.69
CHFR-209ENST00000535181 GBP7Q8N8V2 638 aaPredicted RBP19.39■□□□□ 0.69
CHFR-209ENST00000535181 ACOT4Q8N9L9 421 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 MTFMTQ96DP5 389 aaKnown RBP19.39■□□□□ 0.69
CHFR-209ENST00000535181 PEX11GQ96HA9 241 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 ZNF717Q9BY31 904 aaPredicted RBP19.39■□□□□ 0.69
CHFR-209ENST00000535181 LYRM4Q9HD34 91 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 LANCL2Q9NS86 450 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 FARSBQ9NSD9 589 aaKnown RBP19.39■□□□□ 0.69
CHFR-209ENST00000535181 NMRK1Q9NWW6 199 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 DAPP1Q9UN19 280 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 ITPR1Q14643 2758 aa19.39■□□□□ 0.69
CHFR-209ENST00000535181 A0A0G2JN53 185 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 A0A1W2PQ72 361 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 DNAJB6O75190 326 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 SASH3O75995 380 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 UROSP10746 265 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 CERS1P27544 350 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 OTX2P32243 289 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 EMP2P54851 167 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 RAB38P57729 211 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 RUNX2Q13950 521 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 TCHHL1Q5QJ38 904 aaPredicted RBP19.38■□□□□ 0.69
CHFR-209ENST00000535181 RNF165Q6ZSG1 346 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 CUZD1Q86UP6 607 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 TMEM151BQ8IW70 566 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 MGAQ8IWI9 3026 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 GOLGA6L1Q8N7Z2 621 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 VPS50Q96JG6 964 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 DDX31Q9H8H2 851 aaKnown RBP19.38■□□□□ 0.69
CHFR-209ENST00000535181 AHSPQ9NZD4 102 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 ADAM29Q9UKF5 820 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 MKL2Q9ULH7 1088 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 HS3ST3B1Q9Y662 390 aa19.38■□□□□ 0.69
CHFR-209ENST00000535181 CACNA1BQ00975 2339 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 PSMD12O00232 456 aaPredicted RBP19.37■□□□□ 0.69
CHFR-209ENST00000535181 SAP18O00422 153 aaKnown RBP19.37■□□□□ 0.69
CHFR-209ENST00000535181 RTCAO00442 366 aaKnown RBP19.37■□□□□ 0.69
CHFR-209ENST00000535181 SH3BGRLO75368 114 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 JRKO75564 520 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 SNUPNO95149 360 aaKnown RBP19.37■□□□□ 0.69
CHFR-209ENST00000535181 SERPINE1P05121 402 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 HEXBP07686 556 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 FGF4P08620 206 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 BSGP35613 385 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 FOXA1P55317 472 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 LIM2P55344 173 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 TTMPQ5BVD1 217 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 SGO1Q5FBB7 561 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 ARL13AQ5H913 290 aaPredicted RBP19.37■□□□□ 0.69
CHFR-209ENST00000535181 TMEM205Q6UW68 189 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 ZCCHC23Q6ZST2 131 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 NUDT13Q86X67 352 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 PRSS58Q8IYP2 241 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 SHISA5Q8N114 240 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 PLPP5Q8NEB5 264 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 KCNA7Q96RP8 456 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 VN1R1Q9GZP7 353 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 TNFRSF12AQ9NP84 129 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 NKIRAS1Q9NYS0 192 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 MAN2B2Q9Y2E5 1009 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 TIMM22Q9Y584 194 aa19.37■□□□□ 0.69
CHFR-209ENST00000535181 LOC102723996A0A087X1L8 192 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 A0A0A6YYD5 115 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 HMGB1P1B2RPK0 211 aaPredicted RBP19.36■□□□□ 0.69
CHFR-209ENST00000535181 TMEM114B3SHH9 223 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 PEX12O00623 359 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 SOCS6O14544 535 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 AZIN1O14977 448 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 CRCPO75575 148 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 GRK2P25098 689 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 HTR6P50406 440 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 EFNA3P52797 238 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 WDR4P57081 412 aaKnown RBP19.36■□□□□ 0.69
CHFR-209ENST00000535181 RHAGQ02094 409 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 DEFB109BQ30KR1 87 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 MINDY4Q4G0A6 757 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 HHATQ5VTY9 493 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 BORAQ6PGQ7 559 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 QSOX2Q6ZRP7 698 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 APLFQ8IW19 511 aaPredicted RBP19.36■□□□□ 0.69
CHFR-209ENST00000535181 METTL4Q8N3J2 472 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 ANKRD42Q8N9B4 389 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 TMEM102Q8N9M5 508 aaPredicted RBP19.36■□□□□ 0.69
CHFR-209ENST00000535181 PPP1R14CQ8TAE6 165 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 TTC9Q92623 222 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 ACBD3Q9H3P7 528 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 P4HTMQ9NXG6 502 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 MS4A12Q9NXJ0 267 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 KCMF1Q9P0J7 381 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 VPS29Q9UBQ0 182 aa19.36■□□□□ 0.69
CHFR-209ENST00000535181 SLC12A4Q9UP95 1085 aa19.36■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms