RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 TBC1D19Q8N5T2 526 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 C19orf47Q8N9M1 422 aaKnown RBP11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF740Q8NDX6 193 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 OR7G3Q8NG95 312 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 WDR20Q8TBZ3 569 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 REPS1Q96D71 796 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SLC41A2Q96JW4 573 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 OR52B2Q96RD2 323 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 ADGRE2Q9UHX3 823 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SNX6Q9UNH7 406 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 CEP250Q9BV73 2442 aa11.74□□□□□ -0.53
SCARB1-204ENST00000535005 SNRNP200O75643 2136 aaKnown RBP11.73□□□□□ -0.53
SCARB1-204ENST00000535005 HEATR5BQ9P2D3 2071 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 TCRBV3S1A0A5B6 114 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 HAT1O14929 419 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 CTSVO60911 334 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 KRT6AP02538 564 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 KRT6BP04259 564 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 MSL3P1P0C860 447 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 BMP2P12643 396 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 SERPINB1P30740 379 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 AHRP35869 848 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 KRT6CP48668 564 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 RPS15AP62244 130 aaKnown RBP11.73□□□□□ -0.53
SCARB1-204ENST00000535005 MS4A2Q01362 244 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 CPSF6Q16630 551 aaKnown RBP eCLIP11.73□□□□□ -0.53
SCARB1-204ENST00000535005 LSM12Q3MHD2 195 aaKnown RBP11.73□□□□□ -0.53
SCARB1-204ENST00000535005 SPATS1Q496A3 300 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 CDCP2Q5VXM1 449 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 FRG2Q64ET8 278 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 PPP4R4Q6NUP7 873 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 ADCK2Q7Z695 626 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 GALNT4Q8N4A0 578 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 DNAJC22Q8N4W6 341 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 AFAP1L2Q8N4X5 818 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 MFSD9Q8NBP5 474 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 TTLQ8NG68 377 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 USP7Q93009 1102 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 FRG2BQ96QU4 278 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 KCNA7Q96RP8 456 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 ZNF768Q9H5H4 540 aaKnown RBP11.73□□□□□ -0.53
SCARB1-204ENST00000535005 OLAHQ9NV23 265 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 PPT2Q9UMR5 302 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 B3GNT3Q9Y2A9 372 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 DNAJC15Q9Y5T4 150 aa11.73□□□□□ -0.53
SCARB1-204ENST00000535005 MANBAO00462 879 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 LCMT2O60294 686 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CRCPO75575 148 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CEACAM1P13688 526 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 NELFEP18615 380 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PIK3CBP42338 1070 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 HSD11B2P80365 405 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 GK3PQ14409 553 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ZC3H12BQ5HYM0 836 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 INTS11Q5TA45 600 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CLEC6AQ6EIG7 209 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 NCCRP1Q6ZVX7 275 aaPredicted RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 D2HGDHQ8N465 521 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PNPT1Q8TCS8 783 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ISOC1Q96CN7 298 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 HSPBAP1Q96EW2 488 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 MAELQ96JY0 434 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 OR2A5Q96R48 311 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ZFYVE21Q9BQ24 234 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TUBA1CQ9BQE3 449 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TRIM15Q9C019 465 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 KLHL25Q9H0H3 589 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 FAM60AQ9NP50 221 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PDE7BQ9NP56 450 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ENAMQ9NRM1 1142 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ARMC1Q9NVT9 282 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 KLHL3Q9UH77 587 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PCDHGB4Q9UN71 923 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TMED5Q9Y3A6 229 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TIMM22Q9Y584 194 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PCDHGB5Q9Y5G0 923 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 AP1M2Q9Y6Q5 423 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 C7orf72A4D263 438 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TMEM233B4DJY2 109 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 FOXE1O00358 373 aaPredicted RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 FFAR3O14843 346 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 GPR42O15529 346 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 OR1F1O43749 312 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 NRP2O60462 931 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PRAMEF10O60809 474 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ULK1O75385 1050 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CHEK2O96017 543 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 MYF6P23409 242 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 EPHA3P29320 983 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 CCKBRP32239 447 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 BCL6P41182 706 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 GABRA4P48169 554 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 INSM1Q01101 510 aaPredicted RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 SAMD4BQ5PRF9 694 aaKnown RBP11.72□□□□□ -0.53
SCARB1-204ENST00000535005 TRIM46Q7Z4K8 759 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 SLCO6A1Q86UG4 719 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 PLD3Q8IV08 490 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 EFCAB3Q8N7B9 438 aa11.72□□□□□ -0.53
SCARB1-204ENST00000535005 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms