RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 GREB1Q4ZG55 1949 aa3.15□□□□□ -1.91
USP48-215ENST00000534705 DOCK8Q8NF50 2099 aa3.15□□□□□ -1.91
USP48-215ENST00000534705 MYH10P35580 1976 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 IGLV3-22A0A075B6J6 115 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SYNJ2BP-COX16A0A087WUM0 186 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 A0A0U1RQK1 487 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 hCG_1809904A0A1W2PP81 198 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 A0A1W2PPE2 198 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 A0A1W2PR64 198 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ESYT2A0FGR8 921 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 MED19A0JLT2 244 aaPredicted RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 ZNF320A2RRD8 509 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 LRRC72A6NJI9 287 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PRR32B1ATL7 298 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 CLIC2O15247 247 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ZBTB14O43829 449 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 KIF5CO60282 957 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 CIDEAO60543 219 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PNPP00491 289 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ABCB1P08183 1280 aaPredicted RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 KRT19P08727 400 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 POLR2MP0CAP2 368 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 FDPSP14324 419 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 GNAZP19086 355 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ITGA3P26006 1051 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 RDXP35241 583 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 NRIP1P48552 1158 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ARSEP51690 589 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PPP5CP53041 499 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PNLIPRP2P54317 469 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ERVK11-1P61568 191 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SNRPEP62304 92 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 GNB1P62873 340 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ITGA7Q13683 1181 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 HSDL1Q3SXM5 330 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 CCDC40Q4G0X9 1142 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 CELF3Q5SZQ8 465 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 ARHGEF16Q5VV41 709 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 KRT79Q5XKE5 535 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ADALQ6DHV7 355 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 KLHL10Q6JEL2 608 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SHQ1Q6PI26 577 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 ARHGAP22Q7Z5H3 698 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PPFIBP2Q8ND30 876 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PAPD5Q8NDF8 572 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 OR6J1Q8NGC5 347 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 CFAP61Q8NHU2 1237 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SPATA18Q8TC71 538 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 TAS1R2Q8TE23 839 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 C17orf50Q8WW18 174 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 LZICQ8WZA0 190 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 P3H4Q92791 437 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 BADQ92934 168 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 AZIN2Q96A70 460 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 ZNF274Q96GC6 653 aaPredicted RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 LRR1Q96L50 414 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 GLT1D1Q96MS3 346 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 C16orf70Q9BSU1 422 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 UPF3BQ9BZI7 483 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 ZMYND12Q9H0C1 365 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 MMADHCQ9H3L0 296 aaPredicted RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 HHATLQ9HCP6 504 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SLC40A1Q9NP59 571 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 OLFML3Q9NRN5 406 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 BARHL2Q9NY43 387 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 UTP6Q9NYH9 597 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 CACNG4Q9UBN1 327 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 DDX25Q9UHL0 483 aaKnown RBP3.14□□□□□ -1.91
USP48-215ENST00000534705 RABL2BQ9UNT1 228 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 WDR37Q9Y2I8 494 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 C2CD2Q9Y426 696 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 TSC2P49815 1807 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 SCN1AP35498 2009 aa3.14□□□□□ -1.91
USP48-215ENST00000534705 PTPRDP23468 1912 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 XIRP2A4UGR9 3374 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 VCANP13611 3396 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 LOC100509620A0A075B734 347 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 IGKV6D-21A0A0A0MT36 114 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 GSTTP1A0A1W2PQM5 241 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 ARHGEF37A1IGU5 675 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 SMCO2A6NFE2 343 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 ENO4A6NNW6 628 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 LRRIQ3A6PVS8 624 aaPredicted RBP3.13□□□□□ -1.91
USP48-215ENST00000534705 ANKRD65E5RJM6 399 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 FAM86B1E9PN63 330 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 SLCO1B7G3V0H7 640 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 H0YAE9 185 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 PLOD2O00469 737 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 SLC22A2O15244 555 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 PAPSS1O43252 624 aaPredicted RBP3.13□□□□□ -1.91
USP48-215ENST00000534705 PFKFB2O60825 505 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 KERAO60938 352 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 SEC22BO75396 215 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 ERLIN1O75477 346 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 STAM2O75886 525 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 CABYRO75952 493 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 RSL1D1O76021 490 aaKnown RBP3.13□□□□□ -1.91
USP48-215ENST00000534705 GUCA1CO95843 209 aa3.13□□□□□ -1.91
USP48-215ENST00000534705 CLPTM1O96005 669 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms