RNA–Protein interactions for RNA: ENST00000534393.5

RPUSD4-209, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

TSL 4

Gene RPUSD4, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-209ENST00000534393 MLF1P58340 268 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SNRPNP63162 240 aaKnown RBP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 ADORA2A-AS1P86434 159 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 TIAL1Q01085 375 aaKnown RBP eCLIP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 ILF2Q12905 390 aaKnown RBP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 PHKG1Q16816 387 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 FAM45BPQ6NSW5 357 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 MBOAT1Q6ZNC8 495 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 CYP4X1Q8N118 509 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 ARMC10Q8N2F6 343 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 FAM45AQ8TCE6 357 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 EPS8L3Q8TE67 593 aaKnown RBP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SLC5A11Q8WWX8 675 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 ARL8AQ96BM9 186 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 CERS2Q96G23 380 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 LURAP1Q96LR2 239 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 NPAS2Q99743 824 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SH3GL2Q99962 352 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SPOCK3Q9BQ16 436 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 VKORC1Q9BQB6 163 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 AIF1LQ9BQI0 150 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 TMEM109Q9BVC6 243 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 DEFB126Q9BYW3 111 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 ACSS3Q9H6R3 686 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 TMBIM4Q9HC24 238 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 PPANQ9NQ55 473 aaKnown RBP7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 PRDM9Q9NQV7 894 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 FAM53CQ9NYF3 392 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 COQ3Q9NZJ6 369 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SH2B3Q9UQQ2 575 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 VWA7Q9Y334 891 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 DYRK1BQ9Y463 629 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 KCNE2Q9Y6J6 123 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 IKBKGQ9Y6K9 419 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 CSMD2Q7Z408 3487 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 SPG11Q96JI7 2443 aa7.87□□□□□ -1.15
RPUSD4-209ENST00000534393 CELSR1Q9NYQ6 3014 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 A0A088AWK7 358 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TCRBV16S1A1N1A0A5B0 115 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 ZNF860A6NHJ4 632 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SAGE2PA6NJ88 616 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CLDN4O14493 209 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 B4GALT2O60909 372 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 H2AFYO75367 372 aaKnown RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SERPINA6P08185 405 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SNRPB2P08579 225 aaKnown RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 F7P08709 466 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 ZNF888P0CJ79 500 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 ZNF10P21506 573 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 GSTM2P28161 218 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 GABRB3P28472 473 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TPP2P29144 1249 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 MSH2P43246 934 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SCTRP47872 440 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 HNMTP50135 292 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CDKN2DP55273 166 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 STXBP1P61764 594 aaKnown RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TERF2Q15554 542 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 KBTBD12Q3ZCT8 623 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CATSPEREQ5SY80 951 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 DOLPP1Q86YN1 238 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SIAH3Q8IW03 269 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CTAGE3PQ8IX95 158 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 PPM1NQ8N819 430 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TTLQ8NG68 377 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 OR5T3Q8NGG3 340 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 UTP15Q8TED0 518 aaKnown RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 AGAP11Q8TF27 550 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CA5BP1Q8WTZ4 195 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 CHTF18Q8WVB6 975 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TSLPQ969D9 159 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 NEIL2Q969S2 332 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 PYCR2Q96C36 320 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 C14orf79Q96F83 325 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SEC16BQ96JE7 1060 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 PKNOX2Q96KN3 472 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 ATP6V1G3Q96LB4 118 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 OR4K3Q96R72 315 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 NPLQ9BXD5 320 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 HES7Q9BYE0 225 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 RBCK1Q9BYM8 510 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TRIM8Q9BZR9 551 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 SLC6A16Q9GZN6 736 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TSPAN10Q9H1Z9 355 aaPredicted RBP7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 PELI2Q9HAT8 420 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 PLAC1Q9HBJ0 212 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 TBK1Q9UHD2 729 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 MMACHCQ9Y4U1 282 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 FBN2P35556 2912 aa7.86□□□□□ -1.15
RPUSD4-209ENST00000534393 IGKV3D-11A0A0A0MRZ8 115 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 HMGB1P1B2RPK0 211 aaPredicted RBP7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 H3BQF6 201 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 TFECO14948 347 aaPredicted RBP7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 POLR3GO15318 223 aaPredicted RBP7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 MAN1A2O60476 641 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 CDH16O75309 829 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 PIAS1O75925 651 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 GUCA1CO95843 209 aa7.85□□□□□ -1.15
RPUSD4-209ENST00000534393 SMIM10L1P0DMW3 83 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms