RNA–Protein interactions for RNA: ENST00000533069.1

PKP3-209, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 590 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-209ENST00000533069 APOPT1Q96IL0 206 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 CNDP1Q96KN2 507 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 LPAR4Q99677 370 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 NPLQ9BXD5 320 aaPredicted RBP15.67■□□□□ 0.1
PKP3-209ENST00000533069 RNF32Q9H0A6 362 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 RHBGQ9H310 441 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 MAP10Q9P2G4 905 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 GRID1Q9ULK0 1009 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 FLNCQ14315 2725 aa15.67■□□□□ 0.1
PKP3-209ENST00000533069 ANKRD12Q6UB98 2062 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 IGHV3-20A0A0C4DH32 117 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 CLEC18AA5D8T8 446 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 OR2W5A6NFC9 320 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 K7EPI3 171 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 ERI3O43414 337 aaKnown RBP15.66■□□□□ 0.1
PKP3-209ENST00000533069 PRAMEF4O60810 478 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 ZWINTO95229 277 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 B3GALT4O96024 378 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 CELA2AP08217 269 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 ITGAMP11215 1152 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 MTHFD2P13995 350 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 EPB42P16452 691 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 EPORP19235 508 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 SERPINB1P30740 379 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 HNRNPH1P31943 449 aaKnown RBP15.66■□□□□ 0.1
PKP3-209ENST00000533069 CRHR1P34998 444 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 PCDH1Q08174 1060 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 TGM3Q08188 693 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 CHIT1Q13231 466 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 BTBD16Q32M84 506 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 SFT2D3Q587I9 215 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 PRAMEF9Q5VWM5 478 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 TRIM40Q6P9F5 258 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 PAPD4Q6PIY7 484 aaKnown RBP15.66■□□□□ 0.1
PKP3-209ENST00000533069 CLEC18BQ6UXF7 455 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 SH2D5Q6ZV89 423 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 BANPQ8N9N5 519 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 CLEC18CQ8NCF0 446 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 OR2L5Q8NG80 312 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 M1APQ8TC57 530 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 REXO4Q9GZR2 422 aaKnown RBP15.66■□□□□ 0.1
PKP3-209ENST00000533069 AICDAQ9GZX7 198 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 FAM53CQ9NYF3 392 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 MID2Q9UJV3 735 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 ASB1Q9Y576 335 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 CSAG2Q9Y5P2 127 aa15.66■□□□□ 0.1
PKP3-209ENST00000533069 COPG1Q9Y678 874 aaKnown RBP15.66■□□□□ 0.1
PKP3-209ENST00000533069 A0A1W2PPM1 405 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 C4orf51C9J302 202 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 PRMT3O60678 531 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 B4GALT2O60909 372 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 DNAJB6O75190 326 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 PYGBP11216 843 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 GFAPP14136 432 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 CD22P20273 847 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 GNLYP22749 145 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 GLRBP48167 497 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ALDH18A1P54886 795 aaKnown RBP15.65■□□□□ 0.1
PKP3-209ENST00000533069 OR4D2P58180 307 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 PPP2R2AP63151 447 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 BTN3A2P78410 334 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ACTN3Q08043 901 aaPredicted RBP15.65■□□□□ 0.1
PKP3-209ENST00000533069 SETDB1Q15047 1291 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 CCDC153Q494R4 210 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ABHD17BQ5VST6 288 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 METTL2BQ6P1Q9 378 aaKnown RBP15.65■□□□□ 0.1
PKP3-209ENST00000533069 VN1R5Q7Z5H4 357 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 CA13Q8N1Q1 262 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 FAM26EQ8N5C1 309 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 CISD2Q8N5K1 135 aaKnown RBP15.65■□□□□ 0.1
PKP3-209ENST00000533069 ARMC2Q8NEN0 867 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 HAS2Q92819 552 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 TSLPQ969D9 159 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ROGDIQ9GZN7 287 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 VPS11Q9H270 941 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 MMP25Q9NPA2 562 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 PRDM9Q9NQV7 894 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 AGPAT4Q9NRZ5 378 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ASF1BQ9NVP2 202 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 NKIRAS1Q9NYS0 192 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 ZNF490Q9ULM2 529 aaPredicted RBP15.65■□□□□ 0.1
PKP3-209ENST00000533069 MMACHCQ9Y4U1 282 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 CCDC88CQ9P219 2028 aa15.65■□□□□ 0.1
PKP3-209ENST00000533069 TRAV17A0A0B4J275 112 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 SYNDIG1LA6NDD5 238 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 B3GALT2O43825 422 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 KLK8O60259 260 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 UQCRFS1P47985 274 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 PIK3CGP48736 1102 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 TNFSF10P50591 281 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 UBAP2LQ14157 1087 aaKnown RBP15.64■□□□□ 0.09
PKP3-209ENST00000533069 RPUSD3Q6P087 351 aaKnown RBP15.64■□□□□ 0.09
PKP3-209ENST00000533069 MED27Q6P2C8 311 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 LAS2Q8IYD9 372 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 SRFBP1Q8NEF9 429 aaKnown RBP15.64■□□□□ 0.09
PKP3-209ENST00000533069 FAM76AQ8TAV0 307 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 C19orf60Q96EN9 201 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 PTCHD1Q96NR3 888 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 QRFPRQ96P65 431 aa15.64■□□□□ 0.09
PKP3-209ENST00000533069 GPR78Q96P69 363 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms