RNA–Protein interactions for RNA: ENST00000532791.5

FGFR1-238, Transcript of fibroblast growth factor receptor 1, human

APPRIS ALT1 TSL 5 BASIC

Gene FGFR1, Length 5,590 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FGFR1-238	ENST00000532791	ASPG	Q86U10	573 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	EZH1	Q92800	747 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	EXOSC1	Q9Y3B2	195 aa	Known RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	FXYD6-FXYD2	A0A087WZ82	144 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	ASGR2	P07307	311 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	MAGEA12	P43365	314 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	LAPTM4A	Q15012	233 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	CCDC116	Q8IYX3	515 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	GLYATL1	Q969I3	302 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	S100A16	Q96FQ6	103 aa	Known RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	FXYD6	Q9H0Q3	95 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	TMEM59L	Q9UK28	342 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	GSR	P00390	522 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	EPCAM	P16422	314 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	MLLT1	Q03111	559 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	WDR92	Q96MX6	357 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	18.84	■□□□□ 0.61	4e-6	■■■■□ 20.4
FGFR1-238	ENST00000532791	FBRSL1	Q9HCM7	1045 aa	Known RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	STOX2	Q9P2F5	926 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	ABCD2	Q9UBJ2	740 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	SYNGR4	O95473	234 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC15A1	P46059	708 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	STK19	P49842	368 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	PMS2P3	Q13401	168 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	CCIN	Q13939	588 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	ANKDD1A	Q495B1	522 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	NSMAF	Q92636	917 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	FARSA	Q9Y285	508 aa	Known RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	CDC123	O75794	336 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	DUSP3	P51452	185 aa	Predicted RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	KCNC4	Q03721	635 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	C1orf189	Q5VU69	101 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	TXNDC5	Q8NBS9	432 aa	Known RBP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR6N2	Q8NGY6	317 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	TMEM234	Q8WY98	164 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	THRSP	Q92748	146 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	PTCHD1	Q96NR3	888 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	G6PC3	Q9BUM1	346 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	HPF1	Q9NWY4	346 aa		18.84	■□□□□ 0.61
FGFR1-238	ENST00000532791	NFAT5	O94916	1531 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791		A0A1W2PP55	124 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	TP53I11	O14683	189 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC16A5	O15375	505 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	C1GALT1C1L	P0DN25	315 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF16	P17020	682 aa	Predicted RBP	18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR1E2	P47887	323 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	ARSJ	Q5FYB0	599 aa	Predicted RBP	18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	BORCS8	Q96FH0	119 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	RNF6	Q9Y252	685 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	NOP16	Q9Y3C1	178 aa	Known RBP	18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR6C70	A6NIJ9	312 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	DISC1	C4P0D8	188 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	FARS2	O95363	451 aa	Known RBP	18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	JAG1	P78504	1218 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	ZNF648	Q5T619	568 aa	Predicted RBP	18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	SLC15A3	Q8IY34	581 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	LRRC20	Q8TCA0	184 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	OR5P2	Q8WZ92	322 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	VNN3	Q9NY84	501 aa		18.83	■□□□□ 0.61
FGFR1-238	ENST00000532791	C13orf42	A0A1B0GVH6	325 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	MPC1L	P0DKB6	136 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	ACRV1	P26436	265 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	HERV-K104	P61576	105 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	TMEM225	Q6GV28	225 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	EIF5AL1	Q6IS14	154 aa	Known RBP	18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF283	Q8N7M2	679 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	FBXL20	Q96IG2	436 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	LRIG1	Q96JA1	1093 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	TTTY10	Q9BZA0	68 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF700	Q9H0M5	742 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	NUDT15	Q9NV35	164 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	SMAD9	O15198	467 aa	Known RBP	18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	RPS3A	P61247	264 aa	Known RBP	18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLP2	Q04941	152 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	RAB39A	Q14964	217 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	LRRC69	Q6ZNQ3	347 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	DPY19L3	Q6ZPD9	716 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	IGDCC3	Q8IVU1	814 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	OR5T2	Q8NGG2	359 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	FAM210A	Q96ND0	272 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	ZNF471	Q9BX82	626 aa	Predicted RBP	18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	ENY2	Q9NPA8	101 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	CMAHP	Q9Y471	501 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	CDH10	Q9Y6N8	788 aa		18.83	■□□□□ 0.6
FGFR1-238	ENST00000532791	AFDN	P55196	1824 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	MAN2A2	P49641	1150 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	MLLT10	P55197	1068 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	ARF3	P61204	181 aa	Predicted RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	ARF1	P84077	181 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLD6	Q8N2A8	252 aa	Known RBP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	GATS	Q8NAP1	163 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	NINJ1	Q92982	152 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	PLCL2	Q9UPR0	1127 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	OARD1	Q9Y530	152 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	TSPAN4	O14817	238 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	CDC40	O60508	579 aa	Known RBP eCLIP	18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	IFNA7	P01567	189 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	FCER2	P06734	321 aa		18.82	■□□□□ 0.6
FGFR1-238	ENST00000532791	HRH2	P25021	359 aa		18.82	■□□□□ 0.6

Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms