RNA–Protein interactions for RNA: ENST00000531873.5

CD44-234, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 584 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-234ENST00000531873 CNTN1Q12860 1018 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 MEF2DQ14814 521 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 TMEM132DQ14C87 1099 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 PTPN14Q15678 1187 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CEBPEQ15744 281 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ZNF718Q3SXZ3 478 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GTDC1Q4AE62 458 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CCDC40Q4G0X9 1142 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 FASTKD1Q53R41 847 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 CT45A2Q5DJT8 189 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 C9orf50Q5SZB4 431 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ARHGEF16Q5VV41 709 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 NKAIN2Q5VXU1 208 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 PLPP4Q5VZY2 271 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 FAM53AQ6NSI3 398 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 ZNF790Q6PG37 636 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 TRIM65Q6PJ69 517 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 UNC5DQ6UXZ4 953 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GDPD4Q6W3E5 623 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 MACC1Q6ZN28 852 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 SH2D5Q6ZV89 423 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CYP4V2Q6ZWL3 525 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 TRMT1LQ7Z2T5 733 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 SYVN1Q86TM6 617 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 LACC1Q8IV20 430 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 DND1Q8IYX4 353 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 ZNF444Q8N0Y2 327 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 ADAD2Q8NCV1 583 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 OR56B1Q8NGI3 324 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 OR13C5Q8NGS8 318 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 OR4L1Q8NH43 312 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ZNRF4Q8WWF5 429 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 SMPDL3AQ92484 453 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 CASP10Q92851 521 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GIMAP5Q96F15 307 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 C14orf79Q96F83 325 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 PRAC1Q96KF2 57 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 C2orf48Q96LS8 159 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 GPR137Q96N19 417 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 S1PR3Q99500 378 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 JPH2Q9BR39 696 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 UBAC1Q9BSL1 405 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 TDRD1Q9BXT4 1180 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 CCSER1Q9C0I3 900 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 NYXQ9GZU5 481 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 MTIF3Q9H2K0 278 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 ZNF334Q9HCZ1 680 aaPredicted RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 SLC52A3Q9NQ40 469 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 PPANQ9NQ55 473 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 DDX28Q9NUL7 540 aaKnown RBP2.61□□□□□ -1.99
CD44-234ENST00000531873 ACOXLQ9NUZ1 547 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 POLKQ9UBT6 870 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 FAM153AQ9UHL3 310 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 KCNG2Q9UJ96 466 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 POMT2Q9UKY4 750 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 AURKCQ9UQB9 309 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ERVK-19Q9WJR5 959 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 ATP8B3O60423 1300 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 UBE4BO95155 1302 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 NEDD4P46934 1319 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 STK36Q9NRP7 1315 aa2.61□□□□□ -1.99
CD44-234ENST00000531873 A0A1W2PR80 420 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 ANHXE9PGG2 379 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 LMO7DNF2Z398 122 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 OGTO15294 1046 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 KCNAB3O43448 404 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 ECE2O60344 883 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 GMNNO75496 209 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 AP2A2O94973 939 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 AKR7A3O95154 331 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 ZNF18P17022 549 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 GLRA1P23415 457 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 DNAJB1P25685 340 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 MARCKSP29966 332 aaPredicted RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 SOX3P41225 446 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 SLC1A3P43003 542 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 ASMTP46597 345 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 LEPRP48357 1165 aaKnown RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 CCR4P51679 360 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 NLRP11P59045 1033 aaKnown RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 CCZ1BP86790 482 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 CCZ1P86791 482 aaPredicted RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 GUCY2DQ02846 1103 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 GABPAQ06546 454 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 KLHL30Q0D2K2 578 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 FUT7Q11130 342 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 FHL1Q13642 323 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 HEPACAMQ14CZ8 416 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 SPANXN4Q5MJ08 99 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 LYPLAL1Q5VWZ2 237 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 SLC35E4Q6ICL7 350 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 TCEAL6Q6IPX3 200 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 TMEM64Q6YI46 380 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 WDR49Q8IV35 697 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 APLFQ8IW19 511 aaPredicted RBP2.6□□□□□ -1.99
CD44-234ENST00000531873 SLC43A2Q8N370 569 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 DCLK2Q8N568 766 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 TCEANCQ8N8B7 351 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 MINDY2Q8NBR6 621 aa2.6□□□□□ -1.99
CD44-234ENST00000531873 GPRC5AQ8NFJ5 357 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms