RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 DCLK2Q8N568 766 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 OR8J1Q8NGP2 316 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 OR13J1Q8NGT2 312 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 FGFBP3Q8TAT2 258 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 RAET1EQ8TD07 263 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM174Q8WUU8 243 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM255BQ8WV15 326 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SPRYD4Q8WW59 207 aaPredicted RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 SEPT8Q92599 483 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 DPF1Q92782 380 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 WBP2Q969T9 261 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM45BQ96B21 275 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 PHF21AQ96BD5 680 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 MARK4Q96L34 752 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 FCRL4Q96PJ5 515 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 NPY6RQ99463 290 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 NDNQ99608 321 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CMKLR1Q99788 373 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 NDUFAF3Q9BU61 184 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 LRMDAQ9H2I8 198 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 CHMP4BQ9H444 224 aaKnown RBP3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 KLHL9Q9P2J3 617 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ERVK-18Q9QC07 812 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 IL36AQ9UHA7 158 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 PSORS1C1Q9UIG5 152 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 ADAM21Q9UKJ8 722 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 PCDHA7Q9UN72 937 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 AMDHD2Q9Y303 409 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 TMED7Q9Y3B3 224 aa3.99□□□□□ -1.77
AC055878.1-201ENST00000531858 KIF7Q2M1P5 1343 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF123Q5XPI4 1314 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 LOC105371242A0A075B767 164 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TRAV26-1A0A087WT03 109 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 IGHV4-28A0A0C4DH34 117 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 LOC100653049A0A140TA62 436 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 ATP6AP2A0A1C7CYW4 349 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 A0A1W2PRB8 838 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GSAPA4D1B5 854 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 RNF222A6NCQ9 220 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 LILRA5A6NI73 299 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SMIM22K7EJ46 135 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 WRBO00258 174 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TIMM23O14925 209 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 FCMRO60667 390 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CNOT3O75175 753 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 KRT34O76011 436 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 UFL1O94874 794 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 PAHP00439 452 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 UBTFL6P0CB48 400 aaPredicted RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GOT1P17174 413 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 AMD1P17707 334 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GM2AP17900 193 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 MX1P20591 662 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SRD5A2P31213 254 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SSR1P43307 286 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CLDN17P56750 224 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 EEF1A1P68104 462 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CDKL1Q00532 357 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GHRHRQ02643 423 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 HYAL1Q12794 435 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 DRP2Q13474 957 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CDH18Q13634 790 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 MEF2DQ14814 521 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 R3HDM1Q15032 1099 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM35AQ53FP2 167 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 FBXO48Q5FWF7 155 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SPANXN2Q5MJ10 180 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 RABGAP1LQ5R372 815 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 EEF1A1P5Q5VTE0 462 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 PAPD7Q5XG87 772 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF776Q68DI1 518 aaPredicted RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM225Q6GV28 225 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 ASPHD2Q6ICH7 369 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 ZNF793Q6ZN11 406 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GOLGA7Q7Z5G4 137 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GLCCI1Q86VQ1 547 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 PTOV1Q86YD1 416 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 UBQLNLQ8IYU4 475 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 DCP1BQ8IZD4 617 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GBGT1Q8N5D6 347 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 ANKFN1Q8N957 763 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SPERTQ8NA61 448 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SYT14Q8NB59 555 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 GPRC5AQ8NFJ5 357 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 OR9K2Q8NGE7 335 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 OR10Q1Q8NGQ4 319 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SPATA22Q8NHS9 363 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CACTINQ8WUQ7 758 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TSEN15Q8WW01 171 aaKnown RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 DNAJA4Q8WW22 397 aaPredicted RBP3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 SUSD6Q92537 303 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 RND1Q92730 232 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 OSTF1Q92882 214 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CASD1Q96PB1 797 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 CCM2Q9BSQ5 444 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TMEM43Q9BTV4 400 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 MLST8Q9BVC4 326 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 C5orf66Q9H5L9 145 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 TLE6Q9H808 572 aa3.98□□□□□ -1.77
AC055878.1-201ENST00000531858 MEAF6Q9HAF1 191 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms