RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 TCF7P36402 384 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 LONP1P36776 959 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 NNMTP40261 264 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 MNDAP41218 407 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 HNRNPA3P51991 378 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 IFI35P80217 286 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 BEX3Q00994 111 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PPIDQ08752 370 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CBX3Q13185 183 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CUL2Q13617 745 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 GIT2Q14161 759 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 IRF3Q14653 427 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 MORF4L2Q15014 288 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 TMEM266Q2M3C6 531 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 SLC39A12Q504Y0 691 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 C1orf141Q5JVX7 400 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PM20D1Q6GTS8 502 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 UGT3A1Q6NUS8 523 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 TMPRSS11FQ6ZWK6 438 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ITPRIPQ8IWB1 547 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 FAM9CQ8IZT9 166 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ARL14Q8N4G2 192 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 SLC26A7Q8TE54 656 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 RNF139Q8WU17 664 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 NCLNQ969V3 563 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 EFHD2Q96C19 240 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 CABS1Q96KC9 395 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 MTMR9Q96QG7 549 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 UBAC1Q9BSL1 405 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 THUMPD2Q9BTF0 503 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 GCOM2Q9BZD3 368 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 NACAP1Q9BZK3 213 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 FTOQ9C0B1 505 aaKnown RBP eCLIP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PPIL3Q9H2H8 161 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 THAP9Q9H5L6 903 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PSTPIP2Q9H939 334 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 COPS7BQ9H9Q2 264 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 TMEM165Q9HC07 324 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 POLE3Q9NRF9 147 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 HOMER3Q9NSC5 361 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 IARS2Q9NSE4 1012 aaKnown RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 GIMAP4Q9NUV9 329 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 ANO10Q9NW15 660 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 NMRK1Q9NWW6 199 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 MBD2Q9UBB5 411 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 C19orf25Q9UFG5 118 aaPredicted RBP3.16□□□□□ -1.9
PTPRK-220ENST00000531466 RPS6KA6Q9UK32 745 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 GMEB1Q9Y692 573 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 PCDH11YQ9BZA8 1340 aa3.16□□□□□ -1.9
PTPRK-220ENST00000531466 KANK1Q14678 1352 aa3.15□□□□□ -1.9
PTPRK-220ENST00000531466 CARMIL1Q5VZK9 1371 aa3.15□□□□□ -1.9
PTPRK-220ENST00000531466 RNF103-CHMP3A0A140T963 221 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 A0A1W2PQ09 198 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 RGSL1A5PLK6 1076 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GOLGA6L4A6NEF3 574 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 OR6C65A6NJZ3 312 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 H0Y9J4 135 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 H0YAE9 185 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GOLGA8SH3BPF8 625 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 RNF103O00237 685 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 O00370 1275 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 WDR46O15213 610 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 SMPD2O60906 423 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 PEX11AO75192 247 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ERAL1O75616 437 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 BEST1O76090 585 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 THY1P04216 161 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 RB1P06400 928 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 POLR2MP0CAP2 368 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 UBTFL6P0CB48 400 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 RPL35AP18077 110 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GDI1P31150 447 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 EIF2DP41214 584 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 SOX3P41225 446 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 KHKP50053 298 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 HNMTP50135 292 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 CCNHP51946 323 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 HADHBP55084 474 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GMFBP60983 142 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ACY1Q03154 408 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF415Q09FC8 603 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 RIPK1Q13546 671 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 DOC2AQ14183 400 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 TAB1Q15750 504 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 SNCBQ16143 134 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 DPYSL2Q16555 572 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 NTRK2Q16620 822 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 CENPPQ6IPU0 288 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 SLFN11Q7Z7L1 901 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 COMTD1Q86VU5 262 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 C17orf53Q8N3J3 647 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 HDDC3Q8N4P3 179 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 C9orf43Q8TAL5 461 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 C19orf60Q96EN9 201 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 C11orf24Q96F05 449 aaPredicted RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 GBP5Q96PP8 586 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ATP6V0BQ99437 205 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 MRPL1Q9BYD6 325 aaKnown RBP3.15□□□□□ -1.91
PTPRK-220ENST00000531466 ACPTQ9BZG2 426 aa3.15□□□□□ -1.91
PTPRK-220ENST00000531466 TSGA10Q9BZW7 698 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms