RNA–Protein interactions for RNA: ENST00000531118.5

CD44-232, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 877 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-232ENST00000531118 TLX2O43763 284 aaPredicted RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 CD5LO43866 347 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 PRKNO60260 465 aaPredicted RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 SERPING1P05155 500 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 H2AFZP0C0S5 128 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 FAM157CP0CG43 387 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 TNNT1P13805 278 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 MAOAP21397 527 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 TIMP3P35625 211 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 SOX3P41225 446 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ATP5OP48047 213 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 NR1H2P55055 460 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 RPS15AP62244 130 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 OLR1P78380 273 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ABATP80404 500 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 FOXO1Q12778 655 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 SIX1Q15475 284 aaPredicted RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 NFKBIBQ15653 356 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ACKR1Q16570 336 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ANKRD20A2Q5SQ80 823 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 MEI1Q5TIA1 1274 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ANKRD20A1Q5TYW2 823 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ANKRD20A3Q5VUR7 823 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 IL20RBQ6UXL0 311 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 H2AFVQ71UI9 128 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ZNF534Q76KX8 674 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 KCT2Q8NC54 265 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 PPFIBP2Q8ND30 876 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 B3GNT7Q8NFL0 401 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 OR9A1PQ8NGU1 263 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ISL2Q96A47 359 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 LRRC45Q96CN5 670 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 VMP1Q96GC9 406 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 PTCHD1Q96NR3 888 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 ALS2CR12Q96Q35 445 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 PANX3Q96QZ0 392 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 TTC1Q99614 292 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 RBM24Q9BX46 236 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 SRA1Q9HD15 236 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 YAE1D1Q9NRH1 226 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 SPTLC3Q9NUV7 552 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 PIH1D1Q9NWS0 290 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 GALNT8Q9NY28 637 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 TUBA8Q9NY65 449 aaPredicted RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 C6orf203Q9P0P8 240 aaPredicted RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 YARS2Q9Y2Z4 477 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 BZW2Q9Y6E2 419 aaKnown RBP7.58□□□□□ -1.2
CD44-232ENST00000531118 DYSFO75923 2080 aa7.58□□□□□ -1.2
CD44-232ENST00000531118 DEFB108AA8MXU0 73 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 APOC4-APOC2K7ER74 178 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 PRMT5O14744 637 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 B4GALT2O60909 372 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 OR2J2O76002 312 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 MYO1DO94832 1006 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 EPPINO95925 133 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 APOC2P02655 101 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 TP53P04637 393 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 CCL3P10147 92 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 CYLC1P35663 651 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 COILP38432 576 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 AGFG1P52594 562 aaKnown RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 PNLIPRP1P54315 467 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 RAC1P63000 192 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 BTG2P78543 158 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 MEF2AQ02078 507 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 TNK1Q13470 666 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 ARHGAP19Q14CB8 494 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 TERF2Q15554 542 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 ANKRD20A4Q4UJ75 823 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 KCTD11Q693B1 232 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 RTL4Q6ZR62 310 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 FAM47EQ6ZV65 393 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 ASPGQ86U10 573 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 CDKL3Q8IVW4 592 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 CAMKVQ8NCB2 501 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 FBXO15Q8NCQ5 510 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 OR6P1Q8NGX9 317 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 NCLNQ969V3 563 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 NTNG2Q96CW9 530 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 PPP1R2P1Q96PQ5 205 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 RASL10BQ96S79 203 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 EBNA1BP2Q99848 306 aaKnown RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 CCDC77Q9BR77 488 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 SEMA4BQ9NPR2 832 aaPredicted RBP7.57□□□□□ -1.2
CD44-232ENST00000531118 ABCF3Q9NUQ8 709 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 SAMD15Q9P1V8 674 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 SLC2A6Q9UGQ3 507 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 TRIM33Q9UPN9 1127 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 HYOU1Q9Y4L1 999 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 ATG4BQ9Y4P1 393 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 TGP01266 2768 aa7.57□□□□□ -1.2
CD44-232ENST00000531118 PRKDCP78527 4128 aaKnown RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 MACROD2A1Z1Q3 448 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 MBD3L3A6NE82 208 aaPredicted RBP7.56□□□□□ -1.2
CD44-232ENST00000531118 LRRC3CA6NJW4 275 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 ZNF839A8K0R7 811 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 E7ENX8 843 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 H7BY64 318 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 PSTPIP1O43586 416 aa7.56□□□□□ -1.2
CD44-232ENST00000531118 SPRY1O43609 319 aaPredicted RBP7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms