RNA–Protein interactions for RNA: ENST00000528787.1

SSBP3-211, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-211ENST00000528787 ZNF764Q96H86 408 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-211ENST00000528787 SMIM10Q96HG1 83 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 GBP5Q96PP8 586 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 F2RL3Q96RI0 385 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 CTRCQ99895 268 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 SCNM1Q9BWG6 230 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 YIPF2Q9BWQ6 316 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 NUF2Q9BZD4 464 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 ACPTQ9BZG2 426 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 SPRTNQ9H040 489 aaPredicted RBP7.52□□□□□ -1.21
SSBP3-211ENST00000528787 EPN3Q9H201 632 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 OR51B5Q9H339 312 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 CCDC86Q9H6F5 360 aaKnown RBP7.52□□□□□ -1.21
SSBP3-211ENST00000528787 LHX9Q9NQ69 397 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 TCF7L2Q9NQB0 619 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 MIEF1Q9NQG6 463 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 SEMA3GQ9NS98 782 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 FAM53CQ9NYF3 392 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 TRPC4Q9UBN4 977 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF225Q9UK10 706 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 NAALAD2Q9Y3Q0 740 aa7.52□□□□□ -1.21
SSBP3-211ENST00000528787 IGLV3-12A0A075B6K2 115 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 A0A0A6YYC8 382 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 H3BMH7 237 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 I3L1I5 382 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PLPP1O14494 284 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 LSM1O15116 133 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 UBDO15205 165 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 SLC22A2O15244 555 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ITM2AO43736 263 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 RAD1O60671 282 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PRAMEF10O60809 474 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PRAMEF4O60810 478 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 CCDC22O60826 627 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 SOX30O94993 753 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 DLGAP3O95886 979 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NTRK1P04629 796 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 FAM58BPP0C7Q3 252 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NR2F6P10588 404 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 KITP10721 976 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 RORAP35398 523 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 FOLR3P41439 243 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 GCGRP47871 477 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NEK2P51955 445 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 AQP5P55064 265 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 RAB8AP61006 207 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 RPL38P63173 70 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PSPHP78330 225 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 BTKQ06187 659 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ACTN3Q08043 901 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 SLAMF1Q13291 335 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 MAPRE2Q15555 327 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 GALNTL6Q49A17 601 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 GKAP1Q5VSY0 366 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PRAMEF9Q5VWM5 478 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NXNQ6DKJ4 435 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 OR52E8Q6IFG1 317 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NOXRED1Q6NXP6 359 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 EPGNQ6UW88 154 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF517Q6ZMY9 492 aaPredicted RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 FAM47EQ6ZV65 393 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 RPS27LQ71UM5 84 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 CACNA2D3Q8IZS8 1091 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 C1orf52Q8N6N3 182 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ZFP28Q8NHY6 868 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 MAELQ96JY0 434 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ART5Q96L15 291 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 C10orf90Q96M02 699 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 KCNA7Q96RP8 456 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 NRTNQ99748 197 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 SPNS1Q9H2V7 528 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 MYNNQ9NPC7 610 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PRDM7Q9NQW5 492 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PNPOQ9NVS9 261 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 SDAD1Q9NVU7 687 aaKnown RBP eCLIP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ADAM21Q9UKJ8 722 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 DAPP1Q9UN19 280 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 G3BP2Q9UN86 482 aaKnown RBP7.51□□□□□ -1.21
SSBP3-211ENST00000528787 PCDHGA6Q9Y5G7 932 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 ZNF780BQ9Y6R6 833 aa7.51□□□□□ -1.21
SSBP3-211ENST00000528787 A0A0A6YYD5 115 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 A0A0G2JND7 137 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FAM149AA5PLN7 773 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 C9orf172C9J069 976 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 PEX12O00623 359 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 PPP6CO00743 305 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 P2RX6O15547 441 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 BRINP1O60477 761 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 TBX19O60806 448 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 PEX11AO75192 247 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 BCAS2O75934 225 aaPredicted RBP7.5□□□□□ -1.21
SSBP3-211ENST00000528787 DCTN3O75935 186 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FAM107AO95990 144 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 KLK1P06870 262 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 HEXBP07686 556 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 FHP07954 510 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 SPTBP11277 2137 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 ICAM2P13598 275 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 IL1RNP18510 177 aa7.5□□□□□ -1.21
SSBP3-211ENST00000528787 TCN2P20062 427 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms