RNA–Protein interactions for RNA: ENST00000528516.5

LTBP3-210, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 1 (best)

Gene LTBP3, Length 3,935 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-210ENST00000528516 CENPFP49454 3210 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 SLC31A1O15431 190 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 PSIP1O75475 530 aaKnown RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 KLK1P06870 262 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 EPHX1P07099 455 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 PAICSP22234 425 aaKnown RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 FKBP1BP68106 108 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 C19orf57Q0VDD7 668 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 MPPE1Q53F39 396 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 C10orf62Q5T681 223 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 CAPN13Q6MZZ7 669 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 Q6ZSR9 355 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 VWA5B2Q8N398 1253 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF557Q8N988 423 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 MGLLQ99685 303 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 RNF186Q9NXI6 227 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 TVP23BQ9NYZ1 205 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 PCDHGB2Q9Y5G2 931 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 GSAPA4D1B5 854 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 MBLAC1A4D2B0 266 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 BCKDHAP12694 445 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 FDXRP22570 491 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 AP1S1P61966 158 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 RPS26P62854 115 aaKnown RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 HTRA3P83110 453 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 PTSQ03393 145 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 CST9Q5W186 159 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 SMARCD3Q6STE5 483 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF767PQ75MW2 155 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 CLECL1Q8IZS7 167 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 WDR48Q8TAF3 677 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 FERD3LQ96RJ6 166 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 IL1RAPQ9NPH3 570 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 FBXW2Q9UKT8 454 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 DNAJC13O75165 2243 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.2■□□□□ 0.34
LTBP3-210ENST00000528516 MANBAO00462 879 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 SGTAO43765 313 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 PLOD3O60568 738 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 STC2O76061 302 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 ARHGEF15O94989 841 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 CH25HO95992 272 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 KDELC1Q6UW63 502 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 ENTHD1Q8IYW4 607 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 MDGA1Q8NFP4 955 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 C8orf48Q96LL4 319 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 VPS29Q9UBQ0 182 aa17.2■□□□□ 0.34
LTBP3-210ENST00000528516 CA12O43570 354 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 TPPPO94811 219 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 M6PRP20645 277 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 HTR7P34969 479 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 CRISP3P54108 245 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 FBXO43Q4G163 708 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 GPRC6AQ5T6X5 926 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 NUDT18Q6ZVK8 323 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SETD6Q8TBK2 473 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SLC9A6Q92581 669 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 FNDC11Q9BVV2 318 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 RSPH9Q9H1X1 276 aaPredicted RBP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 A3GALT2U3KPV4 340 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ATG2BQ96BY7 2078 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ADH1AP07327 375 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ADORA3P0DMS8 318 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 MAPK8P45983 427 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 EFR3AQ14156 821 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 CLLU1OSQ5K130 101 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 OR2AP1Q8NGE2 309 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 TPT1P8Q9HAU6 139 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 NKIRAS2Q9NYR9 191 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 GLTPQ9NZD2 209 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ZNF624Q9P2J8 865 aaPredicted RBP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 PCTPQ9UKL6 214 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 BRCA1P38398 1863 aaKnown RBP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ATP6V1G2-DDX39BF2Z307 99 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 GNB5O14775 395 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 OR1F1O43749 312 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 PCDH7O60245 1069 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SLC6A4P31645 630 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 GSTM5P46439 218 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 RORCP51449 518 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 NFATC2Q13469 925 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SLBPQ14493 270 aaKnown RBP eCLIP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 TBCEQ15813 527 aaPredicted RBP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 RHEBL1Q8TAI7 183 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 ZFAND1Q8TCF1 268 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 CXorf40AQ8TE69 158 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 GGHQ92820 318 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SLC39A13Q96H72 371 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 C11orf54Q9H0W9 315 aaPredicted RBP17.19■□□□□ 0.34
LTBP3-210ENST00000528516 SLC32A1Q9H598 525 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 KLHL28Q9NXS3 571 aa17.19■□□□□ 0.34
LTBP3-210ENST00000528516 RTCAO00442 366 aaKnown RBP17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ATG13O75143 517 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PDGFAP04085 211 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PCCBP05166 539 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 SLC19A1P41440 591 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 PIK3CBP42338 1070 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 TGM4P49221 684 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ATP13A5Q4VNC0 1218 aa17.18■□□□□ 0.34
LTBP3-210ENST00000528516 ESX1Q8N693 406 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms