RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 PIK3CBP42338 1070 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 PLA2G16P53816 162 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 SLC26A5P58743 744 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ARG2P78540 354 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 BTG2P78543 158 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 GTF2H2Q13888 395 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ESPL1Q14674 2120 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 FAM153CQ494X1 144 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ABHD17BQ5VST6 288 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ADNP2Q6IQ32 1131 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 GTF2H2CQ6P1K8 395 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLEC18BQ6UXF7 455 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 LCA5Q86VQ0 697 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF595Q8IYB9 648 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CISD2Q8N5K1 135 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLEC18CQ8NCF0 446 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 C7orf57Q8NEG2 295 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 TSLPQ969D9 159 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 REPS1Q96D71 796 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CMTM7Q96FZ5 175 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 KCNC2Q96PR1 638 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 F2RL3Q96RI0 385 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 MRPL57Q9BQC6 102 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 COPS7BQ9H9Q2 264 aaPredicted RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 KCNK13Q9HB14 408 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 LYRM4Q9HD34 91 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF358Q9NW07 568 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 CPSF2Q9P2I0 782 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 DAPP1Q9UN19 280 aa11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 MRPS33Q9Y291 106 aaKnown RBP11.37□□□□□ -0.59
TRAPPC4-209ENST00000528230 MYO18BQ8IUG5 2567 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 TRAV17A0A0B4J275 112 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 A0A0G2JN53 185 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 IQANK1A0A1B0GTG1 560 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 BLACEA4D250 179 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 SMIM24O75264 130 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 SCELO95171 688 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 UQCRHP07919 91 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 PCNAP12004 261 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 GCAP28676 217 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 TNFSF10P50591 281 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 LIM2P55344 173 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 SLC29A2Q14542 456 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 MEP1AQ16819 746 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 AP5B1Q2VPB7 878 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRR30Q53SZ7 412 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 DEPDC1Q5TB30 811 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 GOLGA7Q7Z5G4 137 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 UBE3DQ7Z6J8 389 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 SCUBE1Q8IWY4 988 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 LGI4Q8N135 537 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 PTGR2Q8N8N7 351 aaPredicted RBP11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 L3MBTL4Q8NA19 623 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 CATSPER1Q8NEC5 780 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 ELP5Q8TE02 316 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 C19orf60Q96EN9 201 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 SCYL1Q96KG9 808 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 CNDP1Q96KN2 507 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 CCDC77Q9BR77 488 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 NTMT1Q9BV86 223 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 MRPL46Q9H2W6 279 aaKnown RBP11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 IPPKQ9H8X2 491 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 ACTR8Q9H981 624 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 NECTIN3Q9NQS3 549 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 PRTFDC1Q9NRG1 225 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 AGPAT4Q9NRZ5 378 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 ASF1BQ9NVP2 202 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 PLA2G3Q9NZ20 509 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 KCMF1Q9P0J7 381 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 XPR1Q9UBH6 696 aa11.36□□□□□ -0.59
TRAPPC4-209ENST00000528230 OR5H15A6NDH6 313 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 SAGE2PA6NJ88 616 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 A8MUI8 341 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TCP11X1B4DZS4 312 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 CYR61O00622 381 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 CTNSO60931 367 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 SIX3O95343 332 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 CLDN9O95484 217 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 WDPCPO95876 746 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TGFB1P01137 390 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 MAOAP21397 527 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ATP5A1P25705 553 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 PTX3P26022 381 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 CERS1P27544 350 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TNFRSF8P28908 595 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TAS2R50P59544 299 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 PHEXP78562 749 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ZNF33BQ06732 778 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 UBAP2LQ14157 1087 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TERF2Q15554 542 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 INAQ16352 499 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ACER2Q5QJU3 275 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 C10orf62Q5T681 223 aaPredicted RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 KHDRBS2Q5VWX1 349 aaKnown RBP11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 TMEM151AQ8N4L1 468 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 SLC5A8Q8N695 610 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 ACOT4Q8N9L9 421 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 LRRN4CLQ8ND94 238 aa11.35□□□□□ -0.59
TRAPPC4-209ENST00000528230 NFAM1Q8NET5 270 aaPredicted RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms