RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 RMND5BQ96G75 393 aaPredicted RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SMIM10Q96HG1 83 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 ALPK1Q96QP1 1244 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 AIF1LQ9BQI0 150 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 REPIN1Q9BWE0 567 aaKnown RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 CAPS2Q9BXY5 557 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 POLDIP3Q9BY77 421 aaKnown RBP9.86□□□□□ -0.83
CPSF1-203ENST00000527916 UCK2Q9BZX2 261 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 DERL2Q9GZP9 239 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SMYD2Q9NRG4 433 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 GRHL1Q9NZI5 618 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 CTNNAL1Q9UBT7 734 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 SLC22A14Q9Y267 594 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 DYRK1BQ9Y463 629 aa9.86□□□□□ -0.83
CPSF1-203ENST00000527916 MAGEB17A8MXT2 336 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 NDUFS4O43181 175 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 ZNHIT1O43257 154 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RAD51CO43502 376 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RDH16O75452 317 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 STATHP02808 62 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SERPINA6P08185 405 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 ALOX12P18054 663 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 GNAZP19086 355 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 GSTM2P28161 218 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SSTR1P30872 391 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 GGT5P36269 586 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 DGKQP52824 942 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SLC12A2P55011 1212 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TAS2R50P59544 299 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 REEP5Q00765 189 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 MEF2AQ02078 507 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RHAGQ02094 409 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TGFBIQ15582 683 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 MFSD4BQ5TF39 518 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 ZNF572Q7Z3I7 529 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 CD163Q86VB7 1156 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 CRLF3Q8IUI8 442 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 CHERPQ8IWX8 916 aaKnown RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TCAIMQ8N3R3 496 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 ANKRD53Q8N9V6 530 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 POGLUT1Q8NBL1 392 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TTLQ8NG68 377 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 ZCCHC10Q8TBK6 192 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TBC1D20Q96BZ9 403 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RHBDF1Q96CC6 855 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TSPAN17Q96FV3 270 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SEC16BQ96JE7 1060 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 GPR22Q99680 433 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 CPNE1Q99829 537 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SLC6A16Q9GZN6 736 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 PITHD1Q9GZP4 211 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RAB17Q9H0T7 212 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TP63Q9H3D4 680 aaPredicted RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 NT5DC2Q9H857 520 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 SAYSD1Q9NPB0 183 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 LANCL2Q9NS86 450 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 HCN3Q9P1Z3 774 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 LRFN1Q9P244 771 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TXNDC16Q9P2K2 825 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 RNF6Q9Y252 685 aa9.85□□□□□ -0.83
CPSF1-203ENST00000527916 MTO1Q9Y2Z2 717 aaKnown RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 UTP11Q9Y3A2 253 aaKnown RBP9.85□□□□□ -0.83
CPSF1-203ENST00000527916 TLN2Q9Y4G6 2542 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 FN1P02751 2386 aaKnown RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 IGHV3-20A0A0C4DH32 117 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 TCRBV9S1A1TA0A576 114 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 NPEPPSL1A6NEC2 478 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 FAM159BA6NKW6 160 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 GABRR3A8MPY1 467 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 CXorf49A8MYA2 514 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 TFECO14948 347 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 CHST10O43529 356 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 PRMT3O60678 531 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 H2AFYO75367 372 aaKnown RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 CTAG2O75638 210 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 SLC25A12O75746 678 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 C1QAP02745 245 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 FHP07954 510 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 C1GALT1C1LP0DN25 315 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 JAK1P23458 1154 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 GP5P40197 560 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 SLC6A12P48065 614 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 MEOX1P50221 254 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 ATP6V0D1P61421 351 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 ADAM8P78325 824 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 HYAL2Q12891 473 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 ZNF460Q14592 562 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 TSNQ15631 228 aaKnown RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 NSDHLQ15738 373 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 ZKSCAN8Q15776 578 aaPredicted RBP9.84□□□□□ -0.83
CPSF1-203ENST00000527916 DEFB134Q4QY38 66 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 GRTP1Q5TC63 336 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 LANCL3Q6ZV70 420 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 ACAD11Q709F0 780 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 FRA10AC1Q70Z53 315 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 CAMKMTQ7Z624 323 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 FGD2Q7Z6J4 655 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 SHISA5Q8N114 240 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 LGI4Q8N135 537 aa9.84□□□□□ -0.83
CPSF1-203ENST00000527916 GOT1L1Q8NHS2 421 aaPredicted RBP9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms