RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 CDCP1Q9H5V8 836 aa12.55□□□□□ -0.4
CAPN1-207ENST00000527189 NMRAL1Q9HBL8 299 aa12.55□□□□□ -0.4
CAPN1-207ENST00000527189 CD274Q9NZQ7 290 aa12.55□□□□□ -0.4
CAPN1-207ENST00000527189 ZNF490Q9ULM2 529 aaPredicted RBP12.55□□□□□ -0.4
CAPN1-207ENST00000527189 RNF112Q9ULX5 631 aa12.55□□□□□ -0.4
CAPN1-207ENST00000527189 MRPS33Q9Y291 106 aaKnown RBP12.55□□□□□ -0.4
CAPN1-207ENST00000527189 C4orf51C9J302 202 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 FAM227AF5H4B4 570 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 ERI3O43414 337 aaKnown RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 NEURL1O76050 574 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 UNC5CO95185 931 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 S100BP04271 92 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 SP1P08047 785 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 MAOAP21397 527 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 MST1P26927 711 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 HNRNPH1P31943 449 aaKnown RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 TRHRP34981 398 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 HSPA7P48741 367 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 CYB561P49447 251 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 RAB38P57729 211 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 KCNK10P57789 538 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 MLF1P58340 268 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 OC90Q02509 493 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 GUCY2DQ02846 1103 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 TGM3Q08188 693 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 RUNX2Q13950 521 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 XKR6Q5GH73 641 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 SPINK14Q6IE38 97 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 SLC25A25Q6KCM7 469 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 MTFR2Q6P444 385 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 TBC1D1Q86TI0 1168 aaPredicted RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 ISCA2Q86U28 154 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 SCUBE1Q8IWY4 988 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 ZNF595Q8IYB9 648 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 PPM1NQ8N819 430 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 CCT6BQ92526 530 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 QRFPRQ96P65 431 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 UNKQ9C0B0 810 aaKnown RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 ROGDIQ9GZN7 287 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 NECTIN3Q9NQS3 549 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 LRFN1Q9P244 771 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 PPIEQ9UNP9 301 aaKnown RBP12.54□□□□□ -0.4
CAPN1-207ENST00000527189 APCP25054 2843 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 CSMD2Q7Z408 3487 aa12.54□□□□□ -0.4
CAPN1-207ENST00000527189 DIDO1Q9BTC0 2240 aaKnown RBP12.53□□□□□ -0.4
CAPN1-207ENST00000527189 FCHO1O14526 889 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 PRAMEF4O60810 478 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 TBX6O95947 436 aaPredicted RBP12.53□□□□□ -0.4
CAPN1-207ENST00000527189 LTA4HP09960 611 aaKnown RBP12.53□□□□□ -0.4
CAPN1-207ENST00000527189 SLC35E2BP0CK96 405 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 SERPINB1P30740 379 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 KCNC1P48547 511 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 CLCN2P51788 898 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 MTTPP55157 894 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 IRF8Q02556 426 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 CKAP4Q07065 602 aaKnown RBP12.53□□□□□ -0.4
CAPN1-207ENST00000527189 DOC2AQ14183 400 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 EFTUD2Q15029 972 aaKnown RBP eCLIP12.53□□□□□ -0.42e-6■■■□□ 17.7
CAPN1-207ENST00000527189 PRAMEF9Q5VWM5 478 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 ABHD17CQ6PCB6 329 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 ZDHHC24Q6UX98 284 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 LRRC70Q7Z2Q7 622 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 FJX1Q86VR8 437 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 CCDC25Q86WR0 208 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 SNX31Q8N9S9 440 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 B3GNT7Q8NFL0 401 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 RHEBL1Q8TAI7 183 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 FBF1Q8TES7 1133 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 KCNC2Q96PR1 638 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 DEFB126Q9BYW3 111 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 PRTFDC1Q9NRG1 225 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 ANKRD10Q9NXR5 420 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 NUDT4Q9NZJ9 180 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 ADGRE2Q9UHX3 823 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 DAPP1Q9UN19 280 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 ACOT9Q9Y305 439 aa12.53□□□□□ -0.4
CAPN1-207ENST00000527189 DNHD1Q96M86 4753 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 SYCE1LA8MT33 242 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CYR61O00622 381 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 MAN1A2O60476 641 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CCNT2O60583 730 aaKnown RBP12.52□□□□□ -0.41
CAPN1-207ENST00000527189 ZG16O60844 167 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CTNSO60931 367 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 KERAO60938 352 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 TFEBP19484 476 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 TPP2P29144 1249 aaPredicted RBP12.52□□□□□ -0.41
CAPN1-207ENST00000527189 DCTP40126 519 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CA7P43166 264 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 HLCSP50747 726 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 PLA2G16P53816 162 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CASP6P55212 293 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 LIM2P55344 173 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 ALDH6A1Q02252 535 aaKnown RBP12.52□□□□□ -0.41
CAPN1-207ENST00000527189 SLC13A2Q13183 592 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CHIT1Q13231 466 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 TMEM35AQ53FP2 167 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 C1QL3Q5VWW1 255 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 CEP128Q6ZU80 1094 aa12.52□□□□□ -0.41
CAPN1-207ENST00000527189 VN1R5Q7Z5H4 357 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms