RNA–Protein interactions for RNA: ENST00000526044.5

USP48-211, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 549 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-211ENST00000526044 ELK3P41970 407 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 MAGEA3P43357 314 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 MAGEA4P43358 317 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 METAP1P53582 386 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 VSNL1P62760 191 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CRADDP78560 199 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CSTF1Q05048 431 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 SGCGQ13326 291 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 MSLNQ13421 630 aaPredicted RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 POU6F1Q14863 301 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CDKN3Q16667 212 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 TMEM52BQ4KMG9 183 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PIK3CD-AS1Q5SR53 167 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PIP5KL1Q5T9C9 394 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 AWAT2Q6E213 333 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 DGAT2L7PQ6IED9 249 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 C3orf62Q6ZUJ4 267 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 DPPA4Q7L190 304 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 NLRP9Q7RTR0 991 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 GLT6D1Q7Z4J2 308 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CCDC25Q86WR0 208 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CACUL1Q86Y37 369 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 DDIASQ8IXT1 998 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 ZBED8Q8IZ13 594 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 OTUD6BQ8N6M0 293 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 ENDOVQ8N8Q3 282 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 TMEM105Q8N8V8 129 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PCYOX1LQ8NBM8 494 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 SLC2A12Q8TD20 617 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CXorf40AQ8TE69 158 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PYROXD1Q8WU10 500 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 ZBTB9Q96C00 473 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 STAMBPL1Q96FJ0 436 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 VMP1Q96GC9 406 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 CDKN2AIPNLQ96HQ2 116 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 SMIM14Q96QK8 99 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 RANBP9Q96S59 729 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 LYSMD1Q96S90 227 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 FMO2Q99518 471 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 EBNA1BP2Q99848 306 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 WDR83Q9BRX9 315 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 NAT9Q9BTE0 207 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 WRAP53Q9BUR4 548 aaKnown RBP4.35□□□□□ -1.71
USP48-211ENST00000526044 KIFC1Q9BW19 673 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 AAMDCQ9H7C9 122 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 BPIFA1Q9NP55 256 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 SAYSD1Q9NPB0 183 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PKD2L2Q9NZM6 624 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 DTX4Q9Y2E6 619 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 PKP3Q9Y446 797 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 ZNF711Q9Y462 761 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 COL6A3P12111 3177 aa4.35□□□□□ -1.71
USP48-211ENST00000526044 LRRK1Q38SD2 2015 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 IGLV5-39A0A0G2JS06 123 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 A0A0U1RQS6 177 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 FAM237BA0A1B0GVD1 139 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PRR23AA6NEV1 266 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 IGLON5A6NGN9 336 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 NPIPB15A6NHN6 443 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 E7ESA3 106 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 H0Y3Z8 333 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PSMD11O00231 422 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PLRG1O43660 514 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 LDB2O43679 373 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 BUD23O43709 281 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 ERLIN1O75477 346 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 BANF1O75531 89 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TM7SF2O76062 418 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SEMA4FO95754 770 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PAK4O96013 591 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 IGLV3-19P01714 112 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SLC4A1P02730 911 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 LCKP06239 509 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 GSTA2P09210 222 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ZNF30P17039 623 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 HOXB9P17482 250 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 PGAM1P18669 254 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 NMBRP28336 390 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SSTR1P30872 391 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ACSL1P33121 698 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 HADHAP40939 763 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SPINT3P49223 89 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PMS2P54278 862 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TAS2R38P59533 333 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 RPS21P63220 83 aaKnown RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 PRAMEP78395 509 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PLIN5Q00G26 463 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 RALGDSQ12967 914 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 PTPRCAPQ14761 206 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 INPP5JQ15735 1006 aaPredicted RBP4.34□□□□□ -1.71
USP48-211ENST00000526044 KYNUQ16719 465 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 TIGD6Q17RP2 521 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ZNF260Q3ZCT1 412 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ANKRD20A4Q4UJ75 823 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 LRRC73Q5JTD7 316 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 SPANXN3Q5MJ09 141 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 C6orf10Q5SRN2 563 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 MFSD4BQ5TF39 518 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 ZDHHC20Q5W0Z9 365 aa4.34□□□□□ -1.71
USP48-211ENST00000526044 LRRC66Q68CR7 880 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms