RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 AP5B1Q2VPB7 878 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ADPRMQ3LIE5 342 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 GALNTL6Q49A17 601 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CCNYL2Q5T2Q4 361 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 DEPDC1Q5TB30 811 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 VWA5B1Q5TIE3 1220 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 GARNL3Q5VVW2 1013 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 OR4C11Q6IEV9 310 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 MRPL14Q6P1L8 145 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PRMT9Q6P2P2 845 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 INO80CQ6PI98 192 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 FAM47EQ6ZV65 393 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CHSY3Q70JA7 882 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 COMMD6Q7Z4G1 85 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PPP1R32Q7Z5V6 425 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CROCCP2Q86T23 111 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PARP9Q8IXQ6 854 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 AFAP1L2Q8N4X5 818 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ACOT4Q8N9L9 421 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TTLQ8NG68 377 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 OR2Y1Q8NGV0 311 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CLHC1Q8NHS4 586 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TWIST2Q8WVJ9 160 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF75CPQ92670 426 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 GFM2Q969S9 779 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 UBE2E3Q969T4 207 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 RGMAQ96B86 450 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PPWD1Q96BP3 646 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 REPS1Q96D71 796 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CNDP1Q96KN2 507 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 C3orf30Q96M34 536 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 LRFN5Q96NI6 719 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SERINC2Q96SA4 455 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SORT1Q99523 831 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF717Q9BY31 904 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TRIM55Q9BYV6 548 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 B3GNT4Q9C0J1 378 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 VN1R1Q9GZP7 353 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 STMN4Q9H169 189 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 NT5DC2Q9H857 520 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 VIPAS39Q9H9C1 493 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ZNF160Q9HCG1 818 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SSU72Q9NP77 194 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SLCO1B3Q9NPD5 702 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 NECTIN3Q9NQS3 549 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 LANCL2Q9NS86 450 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TEX10Q9NXF1 929 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 G3BP2Q9UN86 482 aaKnown RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 CDC14AQ9UNH5 594 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SNX6Q9UNH7 406 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 TRAF6Q9Y4K3 522 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 MAP4K5Q9Y4K4 846 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ATG4BQ9Y4P1 393 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 POLR3HQ9Y535 204 aaPredicted RBP4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 DNAJC15Q9Y5T4 150 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 ACTL7BQ9Y614 415 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 HS3ST3B1Q9Y662 390 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SLC22A7Q9Y694 548 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 PCSK5Q92824 1860 aa4.34□□□□□ -1.71
CHMP4A-202ENST00000524955 SPTBN2O15020 2390 aa4.34□□□□□ -1.72
CHMP4A-202ENST00000524955 NCOR2Q9Y618 2525 aa4.34□□□□□ -1.72
CHMP4A-202ENST00000524955 SPTBN4Q9H254 2564 aa4.34□□□□□ -1.72
CHMP4A-202ENST00000524955 GOLGA4Q13439 2230 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 UNC13CQ8NB66 2214 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 A0A0A6YYD5 115 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GOLGA8QA0A0J9YX86 632 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 A0A1W2PR48 441 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GOLGA8OA6NCC3 632 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ZNF891A8MT65 544 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 HMGB1P1B2RPK0 211 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 C21orf140B9A014 251 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 C9JVG2 144 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 GOLGA8NF8WBI6 632 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 H0YIG0 161 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PSMD12O00232 456 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FOXE1O00358 373 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 CYR61O00622 381 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SOCS6O14544 535 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PGRMC2O15173 223 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 BIRC5O15392 142 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 AKAP10O43572 662 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FGF17O60258 216 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PRKNO60260 465 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 NPHS1O60500 1241 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 UGDHO60701 494 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 SEC22BO75396 215 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 NME6O75414 186 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 LRATO95237 230 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 AIFM1O95831 613 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 F10P00742 488 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KRT6AP02538 564 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 KRT6BP04259 564 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 ENO1P06733 434 aaKnown RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FHP07954 510 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 IL3P08700 152 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RAB40ALP0C0E4 278 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 FAM58BPP0C7Q3 252 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 UROSP10746 265 aa4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 PIM1P11309 404 aaPredicted RBP4.33□□□□□ -1.72
CHMP4A-202ENST00000524955 RNH1P13489 461 aaKnown RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms