RNA–Protein interactions for RNA: ENST00000524047.5

LINCR-0001-203, humanhuman

TSL 4 BASIC

Gene LINCR-0001, Length 545 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCR-0001-203ENST00000524047 CDH6P55285 790 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 HUNKP57058 714 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MAP3K7CLP57077 242 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 EIF3EP60228 445 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ERVFC1-1P60608 527 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SSTP61278 116 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ATP6V0D1P61421 351 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 KCNJ2P63252 427 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 IFI35P80217 286 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MRPS15P82914 257 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PPP2R2BQ00005 443 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ROR1Q01973 937 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FAM27E3Q08E93 113 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SREBF2Q12772 1141 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PDIA2Q13087 525 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 DPYSL3Q14195 570 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 RCN2Q14257 317 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 TGFBIQ15582 683 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 DPYSL2Q16555 572 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SOWAHAQ2M3V2 549 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 KCNT1Q5JUK3 1230 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 EFHC1Q5JVL4 640 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ARMC4Q5T2S8 1044 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 TXNRD3NBQ6F5E7 133 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PMF1Q6P1K2 205 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 METTL2BQ6P1Q9 378 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ZNF449Q6P9G9 518 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SPSB3Q6PJ21 355 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 C17orf99Q6UX52 265 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 IDO2Q6ZQW0 420 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 CYP4V2Q6ZWL3 525 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SLC26A9Q7LBE3 791 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 STRADAQ7RTN6 431 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NET1Q7Z628 596 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ACOT1Q86TX2 421 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 CDKL3Q8IVW4 592 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PDIK1LQ8N165 341 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ARHGAP24Q8N264 748 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 TMEM86AQ8N2M4 240 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ELMOD1Q8N336 334 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NATD1Q8N6N6 113 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 EMC1Q8N766 993 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ATP6V0D2Q8N8Y2 350 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 C12orf29Q8N999 325 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NAT8LQ8N9F0 302 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SPATA18Q8TC71 538 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ACTL9Q8TC94 416 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SPPL3Q8TCT6 385 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 GDPD5Q8WTR4 605 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FAM172AQ8WUF8 416 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 UCMAQ8WVF2 138 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 DNAJB3Q8WWF6 145 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 CNOT9Q92600 299 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 APBB2Q92870 758 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FAM149B1Q96BN6 582 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SGK3Q96BR1 496 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 KLHL29Q96CT2 875 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 LRRC39Q96DD0 335 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 METTL2AQ96IZ6 378 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 C9orf72Q96LT7 481 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MAGEB18Q96M61 343 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 BIRC8Q96P09 236 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ZNF317Q96PQ6 595 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PRMT1Q99873 361 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FERMT1Q9BQL6 677 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NEURL2Q9BR09 285 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MRPL45Q9BRJ2 306 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MTG1Q9BT17 334 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 CALN1Q9BXU9 219 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NXF3Q9H4D5 531 aaKnown RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 EHD1Q9H4M9 534 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SLC32A1Q9H598 525 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 ECT2Q9H8V3 914 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FANCEQ9HB96 536 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SLC38A7Q9NVC3 462 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SLC39A1Q9NY26 324 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NKIRAS1Q9NYS0 192 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 RRN3Q9NYV6 651 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 TAS2R7Q9NYW3 318 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 CLIC5Q9NZA1 410 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PAK5Q9P286 719 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 RCOR3Q9P2K3 495 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PSMC3IPQ9P2W1 217 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MBD2Q9UBB5 411 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 FAF1Q9UNN5 650 aaPredicted RBP3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NAALADL1Q9UQQ1 740 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 GINS2Q9Y248 185 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 PAM16Q9Y3D7 125 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 USH1CQ9Y6N9 552 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 MYLKQ15746 1914 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 NUP205Q92621 2012 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 GBF1Q92538 1859 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 TANC1Q9C0D5 1861 aa3.22□□□□□ -1.89
LINCR-0001-203ENST00000524047 SF3B1O75533 1304 aaKnown RBP eCLIP3.21□□□□□ -1.89
LINCR-0001-203ENST00000524047 VWA8A3KMH1 1905 aa3.21□□□□□ -1.9
LINCR-0001-203ENST00000524047 A0A1W2PQ67 120 aa3.21□□□□□ -1.9
LINCR-0001-203ENST00000524047 ARHGEF37A1IGU5 675 aa3.21□□□□□ -1.9
LINCR-0001-203ENST00000524047 TYW5A2RUC4 315 aaKnown RBP3.21□□□□□ -1.9
LINCR-0001-203ENST00000524047 FAM47DPA6NHR8 397 aa3.21□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms