RNA–Protein interactions for RNA: ENST00000523990.1

FBXO28-205, Transcript of F-box protein 28, humanhuman

TSL 2

Gene FBXO28, Length 1,415 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-205ENST00000523990 SLC29A3Q9BZD2 475 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 RNF32Q9H0A6 362 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 COPS7BQ9H9Q2 264 aaPredicted RBP17.96■□□□□ 0.47
FBXO28-205ENST00000523990 NECTIN3Q9NQS3 549 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 PRDM7Q9NQW5 492 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 PLA2G3Q9NZ20 509 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 MMACHCQ9Y4U1 282 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 ANGPTL3Q9Y5C1 460 aa17.96■□□□□ 0.47
FBXO28-205ENST00000523990 TNPO3Q9Y5L0 923 aaKnown RBP17.96■□□□□ 0.47
FBXO28-205ENST00000523990 HIVEP3Q5T1R4 2406 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 TCP11X1B4DZS4 312 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 SNRPAP09012 282 aaKnown RBP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 RBP1P09455 135 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 PCNAP12004 261 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 SERPINB1P30740 379 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 TNFSF10P50591 281 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 HNRNPFP52597 415 aaKnown RBP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 MTTPP55157 894 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ZNF33BQ06732 778 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 SRSF1Q07955 248 aaKnown RBP eCLIP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ACTN3Q08043 901 aaPredicted RBP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 TGM3Q08188 693 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 GTF2H2Q13888 395 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ABHD17BQ5VST6 288 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 LIPJQ5W064 366 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 GTF2H2CQ6P1K8 395 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ADGRD1Q6QNK2 874 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ZNF793Q6ZN11 406 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 GOLGA7Q7Z5G4 137 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 SCUBE1Q8IWY4 988 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 PTGR2Q8N8N7 351 aaPredicted RBP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 TMEM52Q8NDY8 209 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 ADAMTS18Q8TE60 1221 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 EPB41L4BQ9H329 900 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 KCNK13Q9HB14 408 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 TEKT2Q9UIF3 430 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 DAPP1Q9UN19 280 aa17.95■□□□□ 0.46
FBXO28-205ENST00000523990 COPG1Q9Y678 874 aaKnown RBP17.95■□□□□ 0.46
FBXO28-205ENST00000523990 SAGE2PA6NJ88 616 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 UGDHO60701 494 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 WDPCPO95876 746 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 F10P00742 488 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 MYBL2P10244 700 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 PIK3CGP48736 1102 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 LIM2P55344 173 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 UBE3DQ7Z6J8 389 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 RNF175Q8N4F7 328 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 FAM47BQ8NA70 645 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 SRFBP1Q8NEF9 429 aaKnown RBP17.94■□□□□ 0.46
FBXO28-205ENST00000523990 CSF3RQ99062 836 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 NPAS2Q99743 824 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 ACTR8Q9H981 624 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 TMCO1Q9UM00 188 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 TSC22D4Q9Y3Q8 395 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 CLDN16Q9Y5I7 305 aa17.94■□□□□ 0.46
FBXO28-205ENST00000523990 NBPF19A0A087WUL8 3843 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 A8MUI8 341 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 STX16-NPEPL1H3BU86 382 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 TGFBR3LH3BV60 316 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 STX16O14662 325 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 SCELO95171 688 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 TGFB1P01137 390 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 EEF1DP29692 281 aaKnown RBP17.93■□□□□ 0.46
FBXO28-205ENST00000523990 SLC29A2Q14542 456 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 TMEM35AQ53FP2 167 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 FCRLBQ6BAA4 426 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 MYLK4Q86YV6 388 aaPredicted RBP17.93■□□□□ 0.46
FBXO28-205ENST00000523990 ARMC2Q8NEN0 867 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 HUS1BQ8NHY5 278 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 ELP5Q8TE02 316 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 MTBPQ96DY7 904 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 PHF21BQ96EK2 531 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 CMTM7Q96FZ5 175 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 SCYL1Q96KG9 808 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 MAGEB10Q96LZ2 347 aaPredicted RBP17.93■□□□□ 0.46
FBXO28-205ENST00000523990 MRPL57Q9BQC6 102 aaKnown RBP17.93■□□□□ 0.46
FBXO28-205ENST00000523990 TBCDQ9BTW9 1192 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 IPPKQ9H8X2 491 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 DMRT3Q9NQL9 472 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 PRTFDC1Q9NRG1 225 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 FETUBQ9UGM5 382 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 ADGRE2Q9UHX3 823 aa17.93■□□□□ 0.46
FBXO28-205ENST00000523990 MRPS33Q9Y291 106 aaKnown RBP17.93■□□□□ 0.46
FBXO28-205ENST00000523990 TRAV17A0A0B4J275 112 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 OR5H15A6NDH6 313 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 H0YIV9 168 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 RTCAO00442 366 aaKnown RBP17.92■□□□□ 0.46
FBXO28-205ENST00000523990 CYR61O00622 381 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 SH3BGRLO75368 114 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 PIK3CBP42338 1070 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 HSD17B7P56937 341 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 MRPL49Q13405 166 aaKnown RBP17.92■□□□□ 0.46
FBXO28-205ENST00000523990 DDX39BQ13838 428 aaKnown RBP17.92■□□□□ 0.46
FBXO28-205ENST00000523990 NR6A1Q15406 480 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 ACER2Q5QJU3 275 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 LGSNQ5TDP6 509 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 KHDRBS2Q5VWX1 349 aaKnown RBP17.92■□□□□ 0.46
FBXO28-205ENST00000523990 RPUSD3Q6P087 351 aaKnown RBP17.92■□□□□ 0.46
FBXO28-205ENST00000523990 TIFABQ6ZNK6 161 aa17.92■□□□□ 0.46
FBXO28-205ENST00000523990 CRLF3Q8IUI8 442 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 6.5 ms