RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 TMEM178AQ8NBL3 297 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 OR2L5Q8NG80 312 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 THAP3Q8WTV1 239 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-209ENST00000522243 RELTQ969Z4 430 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 F2RL3Q96RI0 385 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 NPLQ9BXD5 320 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-209ENST00000522243 DEFB126Q9BYW3 111 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 CD244Q9BZW8 370 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 PHACTR1Q9C0D0 580 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 PITHD1Q9GZP4 211 aaPredicted RBP19.36■□□□□ 0.69
SDCBP-209ENST00000522243 EHD1Q9H4M9 534 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 PCDHGB6Q9Y5F9 930 aa19.36■□□□□ 0.69
SDCBP-209ENST00000522243 TRBV11-1A0A0K0K1C0 115 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MYOCOSA0A1B0GUC4 107 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MYO1DO94832 1006 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 SP1P08047 785 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MLF1P58340 268 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 ALDH6A1Q02252 535 aaKnown RBP19.35■□□□□ 0.69
SDCBP-209ENST00000522243 SLC13A2Q13183 592 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MAPKAPK3Q16644 382 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 ADPRMQ3LIE5 342 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 ABHD17CQ6PCB6 329 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-209ENST00000522243 CLNKQ7Z7G1 428 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 TBC1D1Q86TI0 1168 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-209ENST00000522243 SCUBE1Q8IWY4 988 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 STAG3L4Q8TBR4 150 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 NXNL1Q96CM4 212 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 SEC16BQ96JE7 1060 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 CSF3RQ99062 836 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 COPS7BQ9H9Q2 264 aaPredicted RBP19.35■□□□□ 0.69
SDCBP-209ENST00000522243 IGSF5Q9NSI5 407 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 CLDN16Q9Y5I7 305 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MAST4O15021 2626 aa19.35■□□□□ 0.69
SDCBP-209ENST00000522243 MYO7BQ6PIF6 2116 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 A0A088AWK7 358 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 NPIPA5E9PKD4 350 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 UBXN8O00124 270 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 CCL21O00585 134 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 SH3BGRLO75368 114 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 ZNF10P21506 573 aaPredicted RBP19.34■□□□□ 0.69
SDCBP-209ENST00000522243 MSH2P43246 934 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 CLCN2P51788 898 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 MTTPP55157 894 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 ZNF572Q7Z3I7 529 aaPredicted RBP19.34■□□□□ 0.69
SDCBP-209ENST00000522243 HORMAD2Q8N7B1 307 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 B3GNT7Q8NFL0 401 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 WDR34Q96EX3 536 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 FRMD6Q96NE9 622 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 SERINC2Q96SA4 455 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 ATOH8Q96SQ7 321 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 LRRC1Q9BTT6 524 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 EFCAB11Q9BUY7 163 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 NMRAL1Q9HBL8 299 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 PRDM7Q9NQW5 492 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 NUDT4Q9NZJ9 180 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 FBXW2Q9UKT8 454 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 NPIPA1Q9UND3 350 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 CACNA1DQ01668 2161 aa19.34■□□□□ 0.69
SDCBP-209ENST00000522243 ASPDHA6ND91 283 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 CLDN4O14493 209 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 SLC25A12O75746 678 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 LTA4HP09960 611 aaKnown RBP19.33■□□□□ 0.68
SDCBP-209ENST00000522243 PCNAP12004 261 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 CRABP2P29373 138 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 CYB561P49447 251 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 LIM2P55344 173 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 HSD17B7P56937 341 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 IRF9Q00978 393 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 GUCY2DQ02846 1103 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 RBPJQ06330 500 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 LAPTM5Q13571 262 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 BMPR2Q13873 1038 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 HIST2H2ACQ16777 129 aaPredicted RBP19.33■□□□□ 0.68
SDCBP-209ENST00000522243 PAGE2BQ5JRK9 111 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 HIST2H2AA3Q6FI13 130 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 LRRC70Q7Z2Q7 622 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF227Q86WZ6 799 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 FAM98AQ8NCA5 519 aaKnown RBP19.33■□□□□ 0.68
SDCBP-209ENST00000522243 APCDD1LQ8NCL9 501 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 KCTD4Q8WVF5 259 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 GPR137Q96N19 417 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF223Q9UK11 482 aaPredicted RBP19.33■□□□□ 0.68
SDCBP-209ENST00000522243 DAPP1Q9UN19 280 aa19.33■□□□□ 0.68
SDCBP-209ENST00000522243 RTCAO00442 366 aaKnown RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 FCHO1O14526 889 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 ZNHIT1O43257 154 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 KERAO60938 352 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 HPDP32754 393 aaPredicted RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 CA7P43166 264 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 CKAP4Q07065 602 aaKnown RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 TGM3Q08188 693 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 NAB1Q13506 487 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 UAP1Q16222 522 aaPredicted RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 MROH9Q5TGP6 573 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 C8orf74Q6P047 294 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 UBE3DQ7Z6J8 389 aa19.32■□□□□ 0.68
SDCBP-209ENST00000522243 CPSF7Q8N684 471 aaKnown RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 ZNF473Q8WTR7 871 aaKnown RBP19.32■□□□□ 0.68
SDCBP-209ENST00000522243 SREK1Q8WXA9 508 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms