RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 RELAQ04206 551 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SEMA3BQ13214 749 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 OR56A1Q8NGH5 318 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 C1orf216Q8TAB5 229 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 FAM129BQ96TA1 746 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ELAC1Q9H777 363 aaKnown RBP13.31□□□□□ -0.28
SYNPO-205ENST00000522122 SLC16A5O15375 505 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 LDB2O43679 373 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF3P17036 446 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF8P17098 575 aaPredicted RBP13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ITIH1P19827 911 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ARRB2P32121 409 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 ZCCHC12Q6PEW1 402 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 TMED9Q9BVK6 235 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 FKBP7Q9Y680 259 aa13.31□□□□□ -0.28
SYNPO-205ENST00000522122 HSD3B1P14060 373 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 HSD3B2P26439 372 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PGDP52209 483 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CD83Q01151 205 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 FADDQ13158 208 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PON2Q15165 354 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ANKDD1AQ495B1 522 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ABHD11Q8NFV4 315 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 TRIM36Q9NQ86 728 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 MED31Q9Y3C7 131 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CITO14578 2027 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 EDDM13A0A1B0GTR0 161 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 LEFTY2O00292 366 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 UBXN7O94888 489 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 MPC1LP0DKB6 136 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 RAB8AP61006 207 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PPP3R1P63098 170 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 OR13J1Q8NGT2 312 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 UBXN10Q96LJ8 280 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ERMAPQ96PL5 475 aaPredicted RBP13.3□□□□□ -0.28
SYNPO-205ENST00000522122 BTBD1Q9H0C5 482 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 GPN2Q9H9Y4 310 aaPredicted RBP13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PAK1IP1Q9NWT1 392 aaPredicted RBP13.3□□□□□ -0.28
SYNPO-205ENST00000522122 UPB1Q9UBR1 384 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CDH7Q9ULB5 785 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PCDHA9Q9Y5H5 950 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF840PA6NDX5 716 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PLOD2O00469 737 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 AKT2P31751 481 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 GATMP50440 423 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 NPRL3Q12980 569 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CNKSR3Q6P9H4 555 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 DPY19L3Q6ZPD9 716 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 LINC01465Q8N7H1 131 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ASPNQ9BXN1 380 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PCDHB11Q9Y5F2 797 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 A0A1W2PRG6 482 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CAPN5O15484 640 aaPredicted RBP13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ARL6IP5O75915 188 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 STC2O76061 302 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 SLITRK5O94991 958 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 AHCYP23526 432 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 GNALP38405 381 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 BTN3A2P78410 334 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 TCEAL5Q5H9L2 206 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ENPP7Q6UWV6 458 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 PAQR9Q6ZVX9 377 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 TOMM5Q8N4H5 51 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 DTWD1Q8N5C7 304 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 ATP6V1C2Q8NEY4 427 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 SUN5Q8TC36 379 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 CD180Q99467 661 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 NDC1Q9BTX1 674 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 TAPBPLQ9BX59 468 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 GRIP1Q9Y3R0 1128 aa13.3□□□□□ -0.28
SYNPO-205ENST00000522122 UBR3Q6ZT12 1888 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 AOC2O75106 756 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CPNE3O75131 537 aaKnown RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 JUPP14923 745 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 MATN1P21941 496 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TIA1P31483 386 aaKnown RBP eCLIP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 HTR6P50406 440 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CLCN7P51798 805 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 AKR1D1P51857 326 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ADAM8P78325 824 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 MEF2AQ02078 507 aaPredicted RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 MEDAGQ5VYS4 303 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 IGFN1Q86VF2 1251 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 CAMKVQ8NCB2 501 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 HAVCR1Q96D42 359 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 IGSF21Q96ID5 467 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 EIF3KQ9UBQ5 218 aaKnown RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 A0A075B6Q4 140 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ELOA3DA6NLF2 546 aaPredicted RBP13.29□□□□□ -0.28
SYNPO-205ENST00000522122 SEMA3DO95025 777 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 TACSTD2P09758 323 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 C1GALT1C1LP0DN25 315 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ZNF823P16415 610 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 UQCRC2P22695 453 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 PCSK6P29122 969 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ERVPABLB-1P60509 514 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 GINS1Q14691 196 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 ELOA3BQ3SY89 546 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 SYCE2Q6PIF2 218 aa13.29□□□□□ -0.28
SYNPO-205ENST00000522122 BTN2A1Q7KYR7 527 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms