RNA–Protein interactions for RNA: ENST00000522012.5

R3HCC1-208, Transcript of R3H domain and coiled-coil containing 1, humanhuman

TSL 1 (best)

Gene R3HCC1, Length 1,500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-208ENST00000522012 SCELO95171 688 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 MSL3P1P0C860 447 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 CSTF2P33240 577 aaKnown RBP eCLIP20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 S100A3P33764 101 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 GSTM5P46439 218 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 ITGA1P56199 1179 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 MXRA7P84157 204 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 FOXM1Q08050 763 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 TRIP6Q15654 476 aaKnown RBP20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 TIGD2Q4W5G0 525 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 SPANXN4Q5MJ08 99 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 ANKRD26P1Q6NSI1 321 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 OR7A2PQ8NGA2 310 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 TSPEARQ8WU66 669 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 TESCQ96BS2 214 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 ZNF501Q96CX3 271 aaPredicted RBP20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 RCN3Q96D15 328 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 C10orf90Q96M02 699 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 NPAS2Q99743 824 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 REEP4Q9H6H4 257 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 MAPRE3Q9UPY8 281 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 NDUFAF1Q9Y375 327 aa20.27■□□□□ 0.83
R3HCC1-208ENST00000522012 FITM1A5D6W6 292 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 B2RBV5 119 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 GALR3O60755 368 aaPredicted RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 GUCY1B2O75343 617 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 IL6P05231 212 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 C21orf58P58505 322 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 KLC1Q07866 573 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 UGT8Q16880 541 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 GARNL3Q5VVW2 1013 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 MRM1Q6IN84 353 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 PDSS2Q86YH6 399 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 MMP21Q8N119 569 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 DEFB124Q8NES8 71 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 OR9A4Q8NGU2 314 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 OR6C1Q96RD1 312 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 PRPF18Q99633 342 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 RTKNQ9BST9 563 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 SLC52A3Q9NQ40 469 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 LYARQ9NX58 379 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 TEX10Q9NXF1 929 aaPredicted RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 SH3BP4Q9P0V3 963 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 EXO1Q9UQ84 846 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 ASB4Q9Y574 426 aa20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 GOLGA4Q13439 2230 aaKnown RBP20.26■□□□□ 0.83
R3HCC1-208ENST00000522012 A0A0A6YYC8 382 aaPredicted RBP20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 A0A1W2PP18 115 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 DYTNA2CJ06 578 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 GABRR3A8MPY1 467 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 H3BMH7 237 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 I3L1I5 382 aaPredicted RBP20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 SGK494L7N484 410 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 FBP2O00757 339 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 CFLARO15519 480 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 HNRNPCL1O60812 293 aaKnown RBP20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 MED26O95402 600 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 ALDH9A1P49189 494 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 HNRNPH2P55795 449 aaKnown RBP20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 OLR1P78380 273 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 RUNX2Q13950 521 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 HEPACAMQ14CZ8 416 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 MUM1Q2TAK8 710 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 FAM214AQ32MH5 1076 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 CPTPQ5TA50 214 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 REP15Q6BDI9 236 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 TLDC1Q6P9B6 456 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 RINLQ6ZS11 566 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 R3HCC1LQ7Z5L2 792 aaKnown RBP20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 GPR180Q86V85 440 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 EFCAB3Q8N7B9 438 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 PPCDCQ96CD2 204 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 MAPKAP1Q9BPZ7 522 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 FAIM2Q9BWQ8 316 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 EFCAB1Q9HAE3 211 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 MIEF1Q9NQG6 463 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 CUTCQ9NTM9 273 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 ATG4BQ9Y4P1 393 aa20.25■□□□□ 0.83
R3HCC1-208ENST00000522012 FRYLO94915 3013 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 BBIP1A8MTZ0 92 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 DNAJB6O75190 326 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 PGRP06401 933 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 FURINP09958 794 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 PIM1P11309 404 aaPredicted RBP20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 RPL3P39023 403 aaKnown RBP20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 RASSF2P50749 326 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 PDX1P52945 283 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 EMP3P54852 163 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 SRSF11Q05519 484 aaKnown RBP20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 C16orf72Q14CZ0 275 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 NDUFAF5Q5TEU4 345 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 DTWD1Q8N5C7 304 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 AGBL5Q8NDL9 886 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 OR52E6Q96RD3 313 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 NDC1Q9BTX1 674 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 OCIAD1Q9NX40 245 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 ATP6V1HQ9UI12 483 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 PCDHGA1Q9Y5H4 931 aa20.24■□□□□ 0.83
R3HCC1-208ENST00000522012 A0A1W2PR48 441 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms