RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 CYP4X1Q8N118 509 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 LGI4Q8N135 537 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 BEST3Q8N1M1 668 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 SLC5A8Q8N695 610 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 ARMC2Q8NEN0 867 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 NFAM1Q8NET5 270 aaPredicted RBP15.98■□□□□ 0.15
SQLE-205ENST00000521232 IFT81Q8WYA0 676 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 UBE2E3Q969T4 207 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 GPR78Q96P69 363 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 SERINC2Q96SA4 455 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 CDC42EP4Q9H3Q1 356 aaKnown RBP15.98■□□□□ 0.15
SQLE-205ENST00000521232 PRDM7Q9NQW5 492 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 OLAHQ9NV23 265 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 ABI3Q9P2A4 366 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 OPTCQ9UBM4 332 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 SLC5A6Q9Y289 635 aa15.98■□□□□ 0.15
SQLE-205ENST00000521232 A0A096LPK6 155 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 SAGE2PA6NJ88 616 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 KIF2AO00139 706 aaPredicted RBP15.97■□□□□ 0.15
SQLE-205ENST00000521232 KLK8O60259 260 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 MAN1A2O60476 641 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 RASAL1O95294 804 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 ALDOAP04075 364 aaKnown RBP15.97■□□□□ 0.15
SQLE-205ENST00000521232 RNF224P0DH78 156 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 TYK2P29597 1187 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 ECHS1P30084 290 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 CD96P40200 585 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 MTTPP55157 894 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 HSD17B7P56937 341 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 RAB38P57729 211 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 TAS2R50P59544 299 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 TUBA3CQ13748 450 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 UAP1Q16222 522 aaPredicted RBP15.97■□□□□ 0.15
SQLE-205ENST00000521232 TUBA3EQ6PEY2 450 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 SCUBE1Q8IWY4 988 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 LAS2Q8IYD9 372 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 DNAJB8Q8NHS0 232 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 ADAMTS18Q8TE60 1221 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 ZNF473Q8WTR7 871 aaKnown RBP15.97■□□□□ 0.15
SQLE-205ENST00000521232 SLC44A1Q8WWI5 657 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 F2RL3Q96RI0 385 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 FMO2Q99518 471 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 DAPP1Q9UN19 280 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 CLDN16Q9Y5I7 305 aa15.97■□□□□ 0.15
SQLE-205ENST00000521232 CYR61O00622 381 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 CLDN4O14493 209 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 LDLRP01130 860 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 EPB42P16452 691 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 MSH2P43246 934 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 SERPINB8P50452 374 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 TDGF1P3P51864 188 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 LIM2P55344 173 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 TGM3Q08188 693 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 NAA30Q147X3 362 aaPredicted RBP15.96■□□□□ 0.15
SQLE-205ENST00000521232 SETDB1Q15047 1291 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 ZNF766Q5HY98 468 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 MED27Q6P2C8 311 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 UBE3DQ7Z6J8 389 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 RPS19BP1Q86WX3 136 aaKnown RBP15.96■□□□□ 0.15
SQLE-205ENST00000521232 ZNF595Q8IYB9 648 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 KIF2BQ8N4N8 673 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 MDS2Q8NDY4 140 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 TMEM52Q8NDY8 209 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 SRFBP1Q8NEF9 429 aaKnown RBP15.96■□□□□ 0.15
SQLE-205ENST00000521232 OR7G3Q8NG95 312 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 NR4A3Q92570 626 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 ISL2Q96A47 359 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 SIGLEC12Q96PQ1 595 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 KCNC2Q96PR1 638 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 UTP23Q9BRU9 249 aaKnown RBP15.96■□□□□ 0.15
SQLE-205ENST00000521232 MS4A8Q9BY19 250 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 ROGDIQ9GZN7 287 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 CDCP1Q9H5V8 836 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 PRTFDC1Q9NRG1 225 aa15.96■□□□□ 0.15
SQLE-205ENST00000521232 ACSL3O95573 720 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 CRYABP02511 175 aaKnown RBP15.95■□□□□ 0.14
SQLE-205ENST00000521232 CERS1P27544 350 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 SERPINB1P30740 379 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 MAGEA12P43365 314 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 HNRNPFP52597 415 aaKnown RBP15.95■□□□□ 0.14
SQLE-205ENST00000521232 ALDH18A1P54886 795 aaKnown RBP15.95■□□□□ 0.14
SQLE-205ENST00000521232 RCN2Q14257 317 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 PCBP2Q15366 365 aaKnown RBP eCLIP15.95■□□□□ 0.14
SQLE-205ENST00000521232 TERF2Q15554 542 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 PFKFB4Q16877 469 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 TMEM35AQ53FP2 167 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 GRHL2Q6ISB3 625 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 KLC3Q6P597 504 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 ARMC10Q8N2F6 343 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 TEX9Q8N6V9 391 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 APCDD1LQ8NCL9 501 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 SCMH1Q96GD3 660 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 C5orf34Q96MH7 638 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 TBCDQ9BTW9 1192 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 COPS7BQ9H9Q2 264 aaPredicted RBP15.95■□□□□ 0.14
SQLE-205ENST00000521232 LYRM4Q9HD34 91 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 KCMF1Q9P0J7 381 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 ADGRE2Q9UHX3 823 aa15.95■□□□□ 0.14
SQLE-205ENST00000521232 PPIEQ9UNP9 301 aaKnown RBP15.95■□□□□ 0.14
SQLE-205ENST00000521232 MRPS33Q9Y291 106 aaKnown RBP15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms