RNA–Protein interactions for RNA: ENST00000519072.5

VDAC3-204, Transcript of voltage dependent anion channel 3, humanhuman

TSL 1 (best)

Gene VDAC3, Length 1,123 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VDAC3-204ENST00000519072 KCNE2Q9Y6J6 123 aa12.73□□□□□ -0.37
VDAC3-204ENST00000519072 AKAP6Q13023 2319 aa12.73□□□□□ -0.37
VDAC3-204ENST00000519072 ANKHD1Q8IWZ3 2542 aaKnown RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 NKX2-6A6NCS4 301 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 DNALI1O14645 258 aaPredicted RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 KRT38O76015 456 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 TOXO94900 526 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 TUBB4AP04350 444 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 MSX1P28360 303 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 HSD17B7P56937 341 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 STXBP1P61764 594 aaKnown RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 BBS9Q3SYG4 887 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 EMC4Q5J8M3 183 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 PAOXQ6QHF9 649 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 IGDCC3Q8IVU1 814 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 GPALPP1Q8IXQ4 340 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 DMRTC2Q8IXT2 367 aaPredicted RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 PSD4Q8NDX1 1056 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 ANKRD7Q92527 254 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 RND1Q92730 232 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 NCLNQ969V3 563 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 GAL3ST3Q96A11 431 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 FAR2Q96K12 515 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 CCDC77Q9BR77 488 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 NPLQ9BXD5 320 aaPredicted RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 PLAC1Q9HBJ0 212 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 KCNJ16Q9NPI9 418 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 PRTFDC1Q9NRG1 225 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 PNO1Q9NRX1 252 aaKnown RBP12.72□□□□□ -0.37
VDAC3-204ENST00000519072 DEPPQ9NTK1 212 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 ERVK-11Q9UQG0 969 aa12.72□□□□□ -0.37
VDAC3-204ENST00000519072 ZNF469Q96JG9 3925 aaPredicted RBP12.71□□□□□ -0.37
VDAC3-204ENST00000519072 NAV3Q8IVL0 2385 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 FAM90A27PA6NNH2 459 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 TGFBR3LH3BV60 316 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 NRDCO43847 1150 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 PRKNO60260 465 aaPredicted RBP12.71□□□□□ -0.37
VDAC3-204ENST00000519072 ZFAND5O76080 213 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 ZNF37AP17032 561 aaPredicted RBP12.71□□□□□ -0.37
VDAC3-204ENST00000519072 PPP2R1BP30154 601 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 RAB38P57729 211 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 BTN3A2P78410 334 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 CDKL1Q00532 357 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 RUNX2Q13950 521 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 PPP1R7Q15435 360 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 ACAD11Q709F0 780 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 LRRC8AQ8IWT6 810 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.71□□□□□ -0.371e-6■■■■■ 92.8
VDAC3-204ENST00000519072 RPRMLQ8N4K4 120 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 TTLQ8NG68 377 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 UCK2Q9BZX2 261 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 DEFB127Q9H1M4 99 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 ADAP2Q9NPF8 381 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 PPANQ9NQ55 473 aaKnown RBP12.71□□□□□ -0.37
VDAC3-204ENST00000519072 KCMF1Q9P0J7 381 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 TNFRSF10DQ9UBN6 386 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 MRPS33Q9Y291 106 aaKnown RBP12.71□□□□□ -0.37
VDAC3-204ENST00000519072 PPP2R2CQ9Y2T4 447 aa12.71□□□□□ -0.37
VDAC3-204ENST00000519072 GOLGA6L10A0A0M3HER8 536 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 PINLYPA6NC86 204 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 SYNDIG1LA6NDD5 238 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 TMEM200CA6NKL6 621 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 A8MVJ9 347 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CDC7O00311 574 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CLDN4O14493 209 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ERI3O43414 337 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 OR2J2O76002 312 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 PDE9AO76083 593 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HOXD4P09016 255 aaPredicted RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CD1EP15812 388 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 GNAZP19086 355 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 SAT1P21673 171 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 GSTM2P28161 218 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HNRNPH1P31943 449 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HNMTP50135 292 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 NR0B1P51843 470 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HNRNPFP52597 415 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 NUP107P57740 925 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 PPIAP62937 165 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CCZ1BP86790 482 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CCZ1P86791 482 aaPredicted RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 SLC13A2Q13183 592 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 TMIGD1Q6UXZ0 262 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 C16orf47Q6ZP98 133 aaPredicted RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 RGS9BPQ6ZS82 235 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 CCDC71Q8IV32 467 aaPredicted RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ZNF595Q8IYB9 648 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 KLHDC8AQ8IYD2 350 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 NKAPQ8N5F7 415 aaKnown RBP12.7□□□□□ -0.38
VDAC3-204ENST00000519072 TMEM52Q8NDY8 209 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 OR2M7Q8NG81 312 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ACTRT1Q8TDG2 376 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ASB15Q8WXK1 588 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 MS4A6EQ96DS6 147 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 SEC16BQ96JE7 1060 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ZDHHC11Q9H8X9 412 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HPF1Q9NWY4 346 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 KCNN3Q9UGI6 736 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 ASIC3Q9UHC3 531 aa12.7□□□□□ -0.38
VDAC3-204ENST00000519072 HRNRQ86YZ3 2850 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms