RNA–Protein interactions for RNA: ENST00000517545.5

PCM1-203, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 3,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-203ENST00000517545 HBA1P69905 142 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 SCARB2Q14108 478 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 TEAD4Q15561 434 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.85□□□□□ -0.51
PCM1-203ENST00000517545 XKR6Q5GH73 641 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 MFSD14CQ5VZR4 134 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 OR5H6Q8NGV6 325 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 OR5AK3PQ8NH89 298 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 CHTF18Q8WVB6 975 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 PARK7Q99497 189 aaKnown RBP11.85□□□□□ -0.51
PCM1-203ENST00000517545 TTLL2Q9BWV7 592 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 HCSTQ9UBK5 93 aa11.85□□□□□ -0.51
PCM1-203ENST00000517545 E7EQ34 232 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 MEN1O00255 615 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 GBAP04062 536 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 ANXA4P09525 319 aaPredicted RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 SPAM1P38567 509 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 XCR1P46094 333 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 LIMS1P48059 325 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 RHAGQ02094 409 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 FAPQ12884 760 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 ATP13A5Q4VNC0 1218 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 TMIGD1Q6UXZ0 262 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 GPR65Q8IYL9 337 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 SLC38A6Q8IZM9 456 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 ASB11Q8WXH4 323 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 PIP5K1AQ99755 562 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 POLR2J2Q9GZM3 115 aaKnown RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 SLC25A19Q9HC21 320 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 STUB1Q9UNE7 303 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 RUVBL1Q9Y265 456 aaKnown RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 SNX11Q9Y5W9 270 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 C12orf71A8MTZ7 269 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 TNFRSF21O75509 655 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 AP2A2O94973 939 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 MSL3P1P0C860 447 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 CSTF2P33240 577 aaKnown RBP eCLIP11.84□□□□□ -0.51
PCM1-203ENST00000517545 MLLT3P42568 568 aaPredicted RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 NSG1P42857 185 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 PYDC2Q56P42 97 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 PDZK1Q5T2W1 519 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 SERPINA13PQ6UXR4 307 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 OR4M1Q8NGD0 313 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 OR9Q1Q8NGQ5 310 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 WDR20Q8TBZ3 569 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 SLC6A18Q96N87 628 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 ZIC5Q96T25 663 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 MAPKAP1Q9BPZ7 522 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 SPATA9Q9BWV2 254 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 SEC14L4Q9UDX3 406 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 BTNL2Q9UIR0 455 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 EXO1Q9UQ84 846 aaKnown RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 YARS2Q9Y2Z4 477 aaKnown RBP11.84□□□□□ -0.51
PCM1-203ENST00000517545 MAP4K5Q9Y4K4 846 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 ALPK3Q96L96 1907 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 PCM1Q15154 2024 aa11.84□□□□□ -0.51
PCM1-203ENST00000517545 TRAV19A0A0A6YYK7 116 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 IQCMA0A1B0GVH7 501 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 HYKKA2RU49 373 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 NPIPB15A6NHN6 443 aaPredicted RBP11.83□□□□□ -0.51
PCM1-203ENST00000517545 TPST2O60704 377 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 MTX2O75431 263 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 TSPAN19P0C672 248 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 IFI30P13284 250 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 TATDN3Q17R31 274 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 ADGRF1Q5T601 910 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 C22orf42Q6IC83 251 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 USP50Q70EL3 339 aaPredicted RBP11.83□□□□□ -0.51
PCM1-203ENST00000517545 CHST9Q7L1S5 443 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 PHC2Q8IXK0 858 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 ZNF557Q8N988 423 aaPredicted RBP11.83□□□□□ -0.51
PCM1-203ENST00000517545 TRPV1Q8NER1 839 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 ZFAND1Q8TCF1 268 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 CREB3L4Q8TEY5 395 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 FOXJ1Q92949 421 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 C11orf24Q96F05 449 aaPredicted RBP11.83□□□□□ -0.51
PCM1-203ENST00000517545 PKP4Q99569 1192 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 THSD1Q9NS62 852 aa11.83□□□□□ -0.51
PCM1-203ENST00000517545 SPATA6Q9NWH7 488 aaPredicted RBP11.83□□□□□ -0.51
PCM1-203ENST00000517545 TBL1XO60907 577 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 RECKO95980 971 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 CBSLP0DN79 551 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 ENDOUP21128 410 aaKnown RBP11.83□□□□□ -0.52
PCM1-203ENST00000517545 CBSP35520 551 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 C19orf57Q0VDD7 668 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 DOC2AQ14183 400 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 GCNT6Q5T4J0 391 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 TPGS1Q6ZTW0 290 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 FAM181AQ8N9Y4 354 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 FAM46DQ8NEK8 389 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 VPS37AQ8NEZ2 397 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 SLC25A46Q96AG3 418 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 CIDECQ96AQ7 238 aaPredicted RBP11.83□□□□□ -0.52
PCM1-203ENST00000517545 FAM193BQ96PV7 902 aaPredicted RBP11.83□□□□□ -0.52
PCM1-203ENST00000517545 SLC35A5Q9BS91 424 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 PLEKHB1Q9UF11 243 aaPredicted RBP11.83□□□□□ -0.52
PCM1-203ENST00000517545 RAB23Q9ULC3 237 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 Q9Y3F1 56 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 NINQ8N4C6 2090 aa11.83□□□□□ -0.52
PCM1-203ENST00000517545 TRBV4-1A0A0J9YWV2 114 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms