RNA–Protein interactions for RNA: ENST00000517417.2

PCDHGA1-202, Transcript of protocadherin gamma subfamily A, 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PCDHGA1, Length 4,604 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA1-202ENST00000517417 LBX1P52954 281 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 CDK6Q00534 326 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 IL18Q14116 193 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 RPTNQ6XPR3 784 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR6Q1Q8NGQ2 317 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 METTL21AQ8WXB1 218 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 TBX5Q99593 518 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 POLR2J2Q9GZM3 115 aaKnown RBP10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 RACGAP1Q9H0H5 632 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 NEK6Q9HC98 313 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 ELOVL2Q9NXB9 296 aa10.44□□□□□ -0.74
PCDHGA1-202ENST00000517417 EDDM13A0A1B0GTR0 161 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TRBC2A0A5B9 178 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMEM221A6NGB7 291 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC30A4O14863 429 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SULT1C4O75897 302 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ATXN1LP0C7T5 689 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ALPPL2P10696 532 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ANXA8P13928 327 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 RPP38P78345 283 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF691Q5VV52 312 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 APCDD1Q8J025 514 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR10H4Q8NGA5 316 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 RAB8BQ92930 207 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 BCL7BQ9BQE9 202 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CDADC1Q9BWV3 514 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 KCNH6Q9H252 994 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 GORASP2Q9H8Y8 452 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 LTB4R2Q9NPC1 389 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CALML5Q9NZT1 146 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF222Q9UK12 451 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 MRTO4Q9UKD2 239 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 MBLAC1A4D2B0 266 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 A8MUA0 341 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ARNTLO00327 626 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 BCKDHAP12694 445 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 MTHFD2P13995 350 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 STAT5AP42229 794 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 NR4A2P43354 598 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC15A1P46059 708 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 BTN3A2P78410 334 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 DUOXA1Q1HG43 343 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CYP27C1Q4G0S4 372 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SPIN4Q56A73 249 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 FAM92BQ6ZTR7 304 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 RANBP3LQ86VV4 465 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 NRSN1Q8IZ57 195 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 FAM86B1Q8N7N1 296 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR4C6Q8NH72 309 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMCO6Q96DC7 493 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 GAL3ST1Q99999 423 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 IFT27Q9BW83 186 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 XKR8Q9H6D3 395 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SPHK2Q9NRA0 654 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMEM30AQ9NV96 361 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 PCDHB14Q9Y5E9 798 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 MYO10Q9HD67 2058 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 HOXB2P14652 356 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CRTC2Q53ET0 693 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC30A6Q6NXT4 461 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SHQ1Q6PI26 577 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CCBE1Q6UXH8 406 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 FRRS1Q6ZNA5 592 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 OAFQ86UD1 273 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 OR10H5Q8NGA6 315 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ARRDC2Q8TBH0 407 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ADAMTS16Q8TE57 1224 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 NUDT8Q8WV74 236 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CMTM7Q96FZ5 175 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SLC29A3Q9BZD2 475 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CSNK1G1Q9HCP0 422 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ANKMY1Q9P2S6 941 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF451Q9Y4E5 1061 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 A0A096LPI6 279 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 GRXCR2A6NFK2 248 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 A8MV72 311 aaPredicted RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 HHLA1C9JL84 531 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ADAM23O75077 832 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CBSLP0DN79 551 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 PCSK2P16519 638 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 PFKLP17858 780 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 PTNP21246 168 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CBSP35520 551 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 RPS3AP61247 264 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 PPP2R2BQ00005 443 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 KIAA1161Q6NSJ0 714 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 B3GNT8Q7Z7M8 397 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 JAZF1Q86VZ6 243 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMC8Q8IU68 726 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 NFKBIDQ8NI38 313 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CD200R1Q8TD46 325 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 TMEM203Q969S6 136 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 NARS2Q96I59 477 aaKnown RBP10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 ZNF583Q96ND8 569 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 CPNE5Q9HCH3 593 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 HEBP1Q9NRV9 189 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 SNTG1Q9NSN8 517 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 RHCGQ9UBD6 479 aa10.43□□□□□ -0.74
PCDHGA1-202ENST00000517417 GJD2Q9UKL4 321 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms