RNA–Protein interactions for RNA: ENST00000516428.1

RNU4-54P-201, Transcript of RNA, U4 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU4-54P, Length 129 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-54P-201ENST00000516428 MARCH7Q9H992 704 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MEAF6Q9HAF1 191 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC28A3Q9HAS3 691 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ROPN1Q9HAT0 212 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDH20Q9HBT6 801 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NEK6Q9HC98 313 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HHATLQ9HCP6 504 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 APMAPQ9HDC9 416 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 IL26Q9NPH9 171 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KRCC1Q9NPI7 259 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MKKSQ9NPJ1 570 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR108Q9NPR9 543 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHRAC1Q9NRG0 131 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 YAE1D1Q9NRH1 226 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GSN-AS1Q9NRJ2 163 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZCCHC3Q9NUD5 404 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PIGVQ9NUD9 493 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACOXLQ9NUZ1 547 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 P4HTMQ9NXG6 502 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ANKRD10Q9NXR5 420 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DLL3Q9NYJ7 618 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DONSONQ9NYP3 566 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 UBAP1Q9NZ09 502 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PKD2L2Q9NZM6 624 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR6C2Q9NZP2 312 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CHMP5Q9NZZ3 219 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HACD3Q9P035 362 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SPATA7Q9P0W8 599 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TXNDC16Q9P2K2 825 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLHL13Q9P2N7 655 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 HSFX1Q9UBD0 423 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF14Q9UBS8 474 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DBF4Q9UBU7 674 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PEF1Q9UBV8 284 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MALT1Q9UDY8 824 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CD300AQ9UGN4 299 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NDRG3Q9UGV2 375 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 BCAP29Q9UHQ4 241 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CRLS1Q9UJA2 301 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 POU2F3Q9UKI9 436 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ACSL5Q9ULC5 683 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KIAA1257Q9ULG3 409 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTC7AQ9ULT0 858 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ABT1Q9ULW3 272 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CDC14AQ9UNH5 594 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GPR132Q9UNW8 380 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PLCL2Q9UPR0 1127 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ERVK-19Q9WJR5 959 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RUVBL2Q9Y230 463 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KCNK6Q9Y257 313 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MRPS33Q9Y291 106 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLC9A8Q9Y2E8 581 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PADI2Q9Y2J8 665 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 C15orf41Q9Y2V0 281 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ZBTB32Q9Y2Y4 487 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SH3GLB1Q9Y371 365 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GRIP1Q9Y3R0 1128 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 NFE2L3Q9Y4A8 694 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 OR10H1Q9Y4A9 318 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 TMEM184BQ9Y519 407 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MMP24Q9Y5R2 645 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 KLF2Q9Y5W3 355 aaPredicted RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 CLIC4Q9Y696 253 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SLCO1B1Q9Y6L6 691 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 RNF215Q9Y6U7 377 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 A3GALT2U3KPV4 340 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 GAKO14976 1311 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PFASO15067 1338 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SF3B1O75533 1304 aaKnown RBP eCLIP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 MYO3BQ8WXR4 1341 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ADGRA2Q96PE1 1338 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATXN2Q99700 1313 aaKnown RBP0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 SBNO1A3KN83 1393 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 PNPLA6Q8IY17 1366 aa0.55□□□□□ -2.32
RNU4-54P-201ENST00000516428 ATP10AO60312 1499 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 COL2A1P02458 1487 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 FGD5Q6ZNL6 1462 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TRAV18A0A075B6X5 111 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LOC105371242A0A075B767 164 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A087X0K7 114 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 PPIAL4CA0A0B4J2A2 164 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 IGKV3D-20A0A0C4DH25 116 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LY6G6EA0A0G2JKS1 128 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A0U1RQV5 110 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LOC105378220A0A1B0GUY1 285 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PN81 502 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PNV4 684 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 A0A1W2PQ72 361 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 LOC390937A0A1W2PQ73 354 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GSTTP1A0A1W2PQM5 241 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 TTC26A0AVF1 554 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 ESYT2A0FGR8 921 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 MED19A0JLT2 244 aaPredicted RBP0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 WDR27A2RRH5 827 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 SMCO3A2RU48 225 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GSAPA4D1B5 854 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 BTBD17A6NE02 478 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 GOLGA6L9A6NEM1 432 aa0.54□□□□□ -2.32
RNU4-54P-201ENST00000516428 CCDC182A6NF36 153 aa0.54□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 101.4 ms