RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 SSC4DQ8WTU2 575 aa22.97■■□□□ 1.27
SNF8-213ENST00000514929 SLC44A1Q8WWI5 657 aa22.97■■□□□ 1.27
SNF8-213ENST00000514929 F2RL3Q96RI0 385 aa22.97■■□□□ 1.27
SNF8-213ENST00000514929 SERINC2Q96SA4 455 aa22.97■■□□□ 1.27
SNF8-213ENST00000514929 OLAHQ9NV23 265 aa22.97■■□□□ 1.27
SNF8-213ENST00000514929 MRPS33Q9Y291 106 aaKnown RBP22.97■■□□□ 1.27
SNF8-213ENST00000514929 IGKV3D-11A0A0A0MRZ8 115 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 A8MUA0 341 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 PRAMEF2O60811 474 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 EDN3P14138 238 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 ECHS1P30084 290 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 E2F2Q14209 437 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 SETDB1Q15047 1291 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 PFKFB4Q16877 469 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 TEX9Q8N6V9 391 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 CEP112Q8N8E3 955 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 TRIM44Q96DX7 344 aaPredicted RBP22.96■■□□□ 1.27
SNF8-213ENST00000514929 PAFAH2Q99487 392 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 PRTFDC1Q9NRG1 225 aa22.96■■□□□ 1.27
SNF8-213ENST00000514929 USP9XQ93008 2570 aaPredicted RBP22.96■■□□□ 1.27
SNF8-213ENST00000514929 SAGE2PA6NJ88 616 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 POC1B-GALNT4F8VUJ3 575 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 CLDN4O14493 209 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 CERS1P27544 350 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 SERPINB9P50453 376 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 ALDH18A1P54886 795 aaKnown RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 SLC13A2Q13183 592 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 NAA30Q147X3 362 aaPredicted RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 MYLK4Q86YV6 388 aaPredicted RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 FAM47BQ8NA70 645 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 SRFBP1Q8NEF9 429 aaKnown RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 ELP5Q8TE02 316 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 ZNF473Q8WTR7 871 aaKnown RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 KCNC2Q96PR1 638 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 PSMG3-AS1Q96PY0 264 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 NPAS2Q99743 824 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 MS4A8Q9BY19 250 aa22.95■■□□□ 1.26
SNF8-213ENST00000514929 CPSF2Q9P2I0 782 aaKnown RBP22.95■■□□□ 1.26
SNF8-213ENST00000514929 E2F3O00716 465 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 KRT38O76015 456 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 RASAL1O95294 804 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 SERPINB1P30740 379 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 HSD17B7P56937 341 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 RCN2Q14257 317 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 GRHL2Q6ISB3 625 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 LAS2Q8IYD9 372 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 KIF2BQ8N4N8 673 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 OR7G3Q8NG95 312 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 UHMK1Q8TAS1 419 aaKnown RBP22.94■■□□□ 1.26
SNF8-213ENST00000514929 GPR78Q96P69 363 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 TAAR6Q96RI8 345 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 UTP23Q9BRU9 249 aaKnown RBP22.94■■□□□ 1.26
SNF8-213ENST00000514929 ROGDIQ9GZN7 287 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 CDCP1Q9H5V8 836 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 PRDM7Q9NQW5 492 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 ANKRD10Q9NXR5 420 aa22.94■■□□□ 1.26
SNF8-213ENST00000514929 A0A087WUV0 522 aaPredicted RBP22.93■■□□□ 1.26
SNF8-213ENST00000514929 MAN1A2O60476 641 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 TGFB1P01137 390 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 ST13P50502 369 aaKnown RBP22.93■■□□□ 1.26
SNF8-213ENST00000514929 LIM2P55344 173 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 PCDH1Q08174 1060 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 TUBA3CQ13748 450 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 TMEM35AQ53FP2 167 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 ZNF766Q5HY98 468 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 TUBA3EQ6PEY2 450 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 CHSY3Q70JA7 882 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 RPS19BP1Q86WX3 136 aaKnown RBP22.93■■□□□ 1.26
SNF8-213ENST00000514929 SCUBE1Q8IWY4 988 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 ZNF595Q8IYB9 648 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 LGI4Q8N135 537 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 PLD6Q8N2A8 252 aaKnown RBP22.93■■□□□ 1.26
SNF8-213ENST00000514929 SLX1AQ9BQ83 275 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 TBCDQ9BTW9 1192 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 ACTR8Q9H981 624 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 PNO1Q9NRX1 252 aaKnown RBP22.93■■□□□ 1.26
SNF8-213ENST00000514929 NFU1Q9UMS0 254 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 DAPP1Q9UN19 280 aa22.93■■□□□ 1.26
SNF8-213ENST00000514929 GABRR3A8MPY1 467 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 KLK8O60259 260 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 SH3BGRLO75368 114 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 MYO1DO94832 1006 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 GP1BBP13224 206 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 HNRNPFP52597 415 aaKnown RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 OC90Q02509 493 aaPredicted RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 DDX39BQ13838 428 aaKnown RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 TECRLQ5HYJ1 363 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 IFT20Q8IY31 132 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 TMEM52Q8NDY8 209 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 NFAM1Q8NET5 270 aaPredicted RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 ISL2Q96A47 359 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 CMTM7Q96FZ5 175 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 ZNF358Q9NW07 568 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 ADGRE2Q9UHX3 823 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 ERRFI1Q9UJM3 462 aaPredicted RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 SLC5A6Q9Y289 635 aa22.92■■□□□ 1.26
SNF8-213ENST00000514929 TNPO3Q9Y5L0 923 aaKnown RBP22.92■■□□□ 1.26
SNF8-213ENST00000514929 LRRC14BA6NHZ5 514 aa22.91■■□□□ 1.26
SNF8-213ENST00000514929 RTCAO00442 366 aaKnown RBP22.91■■□□□ 1.26
SNF8-213ENST00000514929 DDAH2O95865 285 aa22.91■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms