RNA–Protein interactions for RNA: ENST00000514484.6

LPCAT1-206, Transcript of lysophosphatidylcholine acyltransferase 1, humanhuman

TSL 3

Gene LPCAT1, Length 756 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT1-206ENST00000514484 GOLGA7Q7Z5G4 137 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 KIF2BQ8N4N8 673 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 PTGR2Q8N8N7 351 aaPredicted RBP17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 ZNF473Q8WTR7 871 aaKnown RBP17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 MS4A8Q9BY19 250 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.74■□□□□ 0.431e-6■■■□□ 16
LPCAT1-206ENST00000514484 PRDM9Q9NQV7 894 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 XPR1Q9UBH6 696 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 ZNF180Q9UJW8 692 aa17.74■□□□□ 0.43
LPCAT1-206ENST00000514484 A0A088AWK7 358 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 TCRBV16S1A1N1A0A5B0 115 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 TGFBR3LH3BV60 316 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 RIPK2O43353 540 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 TGFB1P01137 390 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 ABHD2P08910 425 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 ZNF10P21506 573 aaPredicted RBP17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 GCAP28676 217 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 EEF1DP29692 281 aaKnown RBP17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 TSFMP43897 325 aaKnown RBP17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 TNFSF10P50591 281 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 MTTPP55157 894 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 GTF2H2Q13888 395 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 UBAP2LQ14157 1087 aaKnown RBP17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 GTF2H2CQ6P1K8 395 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 ZNF793Q6ZN11 406 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 UBE3DQ7Z6J8 389 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 CRLF3Q8IUI8 442 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 LAS2Q8IYD9 372 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 BEST3Q8N1M1 668 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 OR7G3Q8NG95 312 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 M1APQ8TC57 530 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 GRHL3Q8TE85 626 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 PHF21BQ96EK2 531 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 SERINC2Q96SA4 455 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 NPAS2Q99743 824 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 CLK4Q9HAZ1 481 aaKnown RBP17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 MMP25Q9NPA2 562 aa17.73■□□□□ 0.43
LPCAT1-206ENST00000514484 MYOCOSA0A1B0GUC4 107 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 CCDC189A1A4V9 331 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 CLEC18AA5D8T8 446 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 PPP2R1BP30154 601 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 HPDP32754 393 aaPredicted RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 LIM2P55344 173 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 PCBP2Q15366 365 aaKnown RBP eCLIP17.72■□□□□ 0.434e-8■■■■■ 36.8
LPCAT1-206ENST00000514484 EIF2S3LQ2VIR3 472 aaKnown RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 ACER2Q5QJU3 275 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 CLEC18BQ6UXF7 455 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 TRMT10CQ7L0Y3 403 aaKnown RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 CLNKQ7Z7G1 428 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 SCUBE1Q8IWY4 988 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 CLEC18CQ8NCF0 446 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 HUS1BQ8NHY5 278 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 HAS2Q92819 552 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 UBE2E3Q969T4 207 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 KCNC2Q96PR1 638 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 MTERF1Q99551 399 aaKnown RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 SORBS1Q9BX66 1292 aaKnown RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 NPLQ9BXD5 320 aaPredicted RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 OR51B5Q9H339 312 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 ACTR8Q9H981 624 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 PRDM7Q9NQW5 492 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 PRTFDC1Q9NRG1 225 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 ANKRD10Q9NXR5 420 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 STMN3Q9NZ72 180 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 TEKT2Q9UIF3 430 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 SPTBN1Q01082 2364 aaKnown RBP17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 ICE1Q9Y2F5 2266 aa17.72■□□□□ 0.43
LPCAT1-206ENST00000514484 SPTAN1Q13813 2472 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 OR5H15A6NDH6 313 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 SAGE2PA6NJ88 616 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 E2F3O00716 465 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 SNRPAP09012 282 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 MYBL2P10244 700 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 CNTFP26441 200 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 ARL1P40616 181 aaPredicted RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 PIK3CGP48736 1102 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 PCDH1Q08174 1060 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 TGM3Q08188 693 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 SLC13A2Q13183 592 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 TEX35Q5T0J7 233 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 RPS27LQ71UM5 84 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 FAM26EQ8N5C1 309 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 ARMC2Q8NEN0 867 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 NSUN5Q96P11 429 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 CDK15Q96Q40 435 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 MAPKAP1Q9BPZ7 522 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 TXLNGYQ9BZA5 131 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 EPB41L4BQ9H329 900 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 IPPKQ9H8X2 491 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 DMRT3Q9NQL9 472 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 PNO1Q9NRX1 252 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 DAPP1Q9UN19 280 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 MMACHCQ9Y4U1 282 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 CLDN16Q9Y5I7 305 aa17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 DIDO1Q9BTC0 2240 aaKnown RBP17.71■□□□□ 0.43
LPCAT1-206ENST00000514484 TRAV17A0A0B4J275 112 aa17.7■□□□□ 0.42
LPCAT1-206ENST00000514484 MYO1DO94832 1006 aa17.7■□□□□ 0.42
LPCAT1-206ENST00000514484 RBP1P09455 135 aa17.7■□□□□ 0.42
LPCAT1-206ENST00000514484 ATP5A1P25705 553 aaKnown RBP17.7■□□□□ 0.42
LPCAT1-206ENST00000514484 SSR2P43308 183 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms