RNA–Protein interactions for RNA: ENST00000512713.5

YIPF3-216, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 306 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-216ENST00000512713 EFTUD2Q15029 972 aaKnown RBP eCLIP8.61□□□□□ -1.032e-10■■■■■ 42.6
YIPF3-216ENST00000512713 MAPKAPK3Q16644 382 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 ZNF787Q6DD87 383 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 SLC25A25Q6KCM7 469 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 TRIM40Q6P9F5 258 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 TBC1D1Q86TI0 1168 aaPredicted RBP8.61□□□□□ -1.03
YIPF3-216ENST00000512713 CTAGE6Q86UF2 777 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 CTAGE4Q8IX94 777 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 CA13Q8N1Q1 262 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 AMER2Q8N7J2 671 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 PPM1NQ8N819 430 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 LRRN4CLQ8ND94 238 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 OR2L5Q8NG80 312 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 THAP3Q8WTV1 239 aaPredicted RBP8.61□□□□□ -1.03
YIPF3-216ENST00000512713 UBE2E3Q969T4 207 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 KIAA1191Q96A73 305 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 MS4A6EQ96DS6 147 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 PTCD3Q96EY7 689 aaKnown RBP8.61□□□□□ -1.03
YIPF3-216ENST00000512713 UBXN10Q96LJ8 280 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 SIGLEC12Q96PQ1 595 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 PHACTR1Q9C0D0 580 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 ROGDIQ9GZN7 287 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 RUBCNLQ9H714 662 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 COPS7BQ9H9Q2 264 aaPredicted RBP8.61□□□□□ -1.03
YIPF3-216ENST00000512713 NMRAL1Q9HBL8 299 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 NECTIN3Q9NQS3 549 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 GRHL1Q9NZI5 618 aa8.61□□□□□ -1.03
YIPF3-216ENST00000512713 ESPL1Q14674 2120 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 A0A0G2JN53 185 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 A8MUA0 341 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 NPIPA5E9PKD4 350 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 FANCGO15287 622 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 POLR3GO15318 223 aaPredicted RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TAPBPO15533 448 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 MAN1A2O60476 641 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 SASH3O75995 380 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 NEURL1O76050 574 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 MYO1DO94832 1006 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TPP2P29144 1249 aaPredicted RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 HNRNPH1P31943 449 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 MAGEA4P43358 317 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 KCNC1P48547 511 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 HSPA7P48741 367 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 HLCSP50747 726 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CLCN2P51788 898 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 MTTPP55157 894 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 MLF1P58340 268 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 GPX6P59796 221 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 PMP22Q01453 160 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 IRF8Q02556 426 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CKAP4Q07065 602 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 NAB1Q13506 487 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 RUNX2Q13950 521 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 DOC2AQ14183 400 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 OR4D1Q15615 310 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TBCCQ15814 346 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 KBTBD12Q3ZCT8 623 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TMEM35AQ53FP2 167 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 BEND6Q5SZJ8 279 aaPredicted RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 RPTNQ6XPR3 784 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CHSY3Q70JA7 882 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 GALNTL5Q7Z4T8 443 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CCDC91Q7Z6B0 441 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 ZNF595Q8IYB9 648 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 KIF2BQ8N4N8 673 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 SRFBP1Q8NEF9 429 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 B3GNT7Q8NFL0 401 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 EXT2Q93063 718 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 SCMH1Q96GD3 660 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 KCNC2Q96PR1 638 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 SERINC2Q96SA4 455 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 NPAS2Q99743 824 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CCDC77Q9BR77 488 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TMEM79Q9BSE2 394 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CD244Q9BZW8 370 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 ALG9Q9H6U8 611 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 PNO1Q9NRX1 252 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 PTBP2Q9UKA9 531 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 ADAM21Q9UKJ8 722 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 NPIPA1Q9UND3 350 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 ACOT9Q9Y305 439 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 CLCA3PQ9Y6N3 262 aa8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TNRC6AQ8NDV7 1962 aaKnown RBP8.6□□□□□ -1.03
YIPF3-216ENST00000512713 TRBV11-1A0A0K0K1C0 115 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 ASPDHA6ND91 283 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 SYCE1LA8MT33 242 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 SUPT3HB4E1H0 165 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 PRSS44E7EML9 344 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 KLRC4-KLRK1H3BQV0 150 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 HNRNPRO43390 633 aaKnown RBP8.59□□□□□ -1.03
YIPF3-216ENST00000512713 NME2P1O60361 137 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 SUPT3HO75486 399 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 WISP3O95389 354 aaPredicted RBP8.59□□□□□ -1.03
YIPF3-216ENST00000512713 IFNA16P05015 189 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 LTA4HP09960 611 aaKnown RBP8.59□□□□□ -1.03
YIPF3-216ENST00000512713 ESRRAP11474 423 aaPredicted RBP8.59□□□□□ -1.03
YIPF3-216ENST00000512713 ZNF24P17028 368 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 TFEBP19484 476 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 NME2P22392 152 aa8.59□□□□□ -1.03
YIPF3-216ENST00000512713 SERPINB1P30740 379 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms