RNA–Protein interactions for RNA: ENST00000512683.1

VEGFA-216, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 475 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-216ENST00000512683 DNAJB6O75190 326 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 PIAS1O75925 651 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 TUBB4AP04350 444 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CD1EP15812 388 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF37AP17032 561 aaPredicted RBP11.72□□□□□ -0.53
VEGFA-216ENST00000512683 TAS2R39P59534 338 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 RAB8AP61006 207 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 HYAL2Q12891 473 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 BIKQ13323 160 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 ZNF460Q14592 562 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 EFTUD2Q15029 972 aaKnown RBP eCLIP11.72□□□□□ -0.538e-10■■■■■ 49.7
VEGFA-216ENST00000512683 RBBP5Q15291 538 aaKnown RBP11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CDSNQ15517 529 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CMPK2Q5EBM0 449 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CDKL4Q5MAI5 379 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 MEX3BQ6ZN04 569 aaKnown RBP11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CDH24Q86UP0 819 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 SCUBE1Q8IWY4 988 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 KLHDC8AQ8IYD2 350 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CYP4Z2PQ8N1L4 340 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 CA13Q8N1Q1 262 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 ANKRD53Q8N9V6 530 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 OR8K3Q8NH51 312 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 ANP32BQ92688 251 aaKnown RBP11.72□□□□□ -0.53
VEGFA-216ENST00000512683 DAZLQ92904 295 aaKnown RBP11.72□□□□□ -0.53
VEGFA-216ENST00000512683 GAL3ST3Q96A11 431 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 SGCZQ96LD1 299 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 RBCK1Q9BYM8 510 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 EHD1Q9H4M9 534 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 KCNJ16Q9NPI9 418 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 SMYD2Q9NRG4 433 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 GPRC5BQ9NZH0 403 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 KCNN3Q9UGI6 736 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 MTORP42345 2549 aa11.72□□□□□ -0.53
VEGFA-216ENST00000512683 PCNX1Q96RV3 2341 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 FAM95CA0A1B0GW59 222 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 CDC7O00311 574 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 CTNSO60931 367 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ITGA10O75578 1167 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 GUCA1CO95843 209 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 TPOP07202 933 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 HOXD4P09016 255 aaPredicted RBP11.71□□□□□ -0.53
VEGFA-216ENST00000512683 C1GALT1C1LP0DN25 315 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 MAOAP21397 527 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 PTGER1P34995 402 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 SSR4P51571 173 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 OLR1P78380 273 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 BTN3A2P78410 334 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 KRTAP21-3Q3LHN1 58 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 NDUFAF5Q5TEU4 345 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 TMIGD1Q6UXZ0 262 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ZBED8Q8IZ13 594 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 KRT78Q8N1N4 520 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 SPATA4Q8NEY3 305 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 MYRIPQ8NFW9 859 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 OR5L2Q8NGL0 311 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ANKRD49Q8WVL7 239 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 KIAA1191Q96A73 305 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 VPS39Q96JC1 886 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ERP44Q9BS26 406 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 SPNS1Q9H2V7 528 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 KLHL31Q9H511 634 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ADAP2Q9NPF8 381 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 PRTFDC1Q9NRG1 225 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 GRHL1Q9NZI5 618 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 MYOTQ9UBF9 498 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 ITGB1BP2Q9UKP3 347 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 FBXW2Q9UKT8 454 aa11.71□□□□□ -0.53
VEGFA-216ENST00000512683 HIVEP1P15822 2718 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CTAGE15A4D2H0 777 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 LRIT2A6NDA9 550 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 A8MVJ9 347 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CXorf49A8MYA2 514 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 FAM47E-STBD1D6RA91 191 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ACOT7O00154 380 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 RAD51CO43502 376 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 B3GALT2O43825 422 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 HS6ST1O60243 411 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CLEC3AO75596 197 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 MYO1DO94832 1006 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 WISP3O95389 354 aaPredicted RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 C1QAP02745 245 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SAT1P21673 171 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SSTR1P30872 391 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 PEX19P40855 299 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 RAB38P57729 211 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 HSF1Q00613 529 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 TGM3Q08188 693 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 TBL3Q12788 808 aaKnown RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ELAVL1Q15717 326 aaKnown RBP11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ADPRMQ3LIE5 342 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CES4AQ5XG92 561 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 HSDL2Q6YN16 418 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 SLCO4C1Q6ZQN7 724 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 ADAMTSL2Q86TH1 951 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CTAGE6Q86UF2 777 aa11.7□□□□□ -0.54
VEGFA-216ENST00000512683 CD163Q86VB7 1156 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms