RNA–Protein interactions for RNA: ENST00000512009.5

TRAPPC13-211, Transcript of trafficking protein particle complex 13, humanhuman

TSL 2

Gene TRAPPC13, Length 5,994 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-211ENST00000512009 A6NLC8 198 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TMEM233B4DJY2 109 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NPIPB9F8W1W9 429 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EEF2KO00418 725 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RPP40O75818 363 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP7B1O75881 506 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR7A10O76100 309 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPP1R3DO95685 299 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TTLL1O95922 423 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PLGP00747 810 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR3C1P04150 777 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ITGB2P05107 769 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EIF4EP06730 217 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CHRNGP07510 517 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NR2F6P10588 404 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 UMPSP11172 480 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PORP16435 677 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TSHRP16473 764 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCSK2P16519 638 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF17P17021 662 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 BMP7P18075 431 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CYP2B6P20813 491 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CFL1P23528 166 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 STOMP27105 288 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RFX3P48380 749 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ENTPD1P49961 510 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 USP46P62068 366 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPIAP62937 165 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CSNK2BP67870 215 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CHRNB3Q05901 458 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RIPPLY1Q0D2K3 151 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MRPL49Q13405 166 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SPIDRQ14159 915 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 STAT4Q14765 748 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NFE2Q16621 373 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LONRF1Q17RB8 773 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MST1LQ2TV78 715 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TECRLQ5HYJ1 363 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 BROXQ5VW32 411 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PRAMEF18Q5VWM3 479 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 EEF1DP3Q658K8 133 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM180BQ6P0A1 224 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C3orf33Q6P1S2 294 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 AAGABQ6PD74 315 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMARCD3Q6STE5 483 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HFE2Q6ZVN8 426 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TAS2R42Q7RTR8 314 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SMIM15Q7Z3B0 74 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 WDSUB1Q8N9V3 476 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CHDHQ8NE62 594 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MCPH1Q8NEM0 835 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZNF555Q8NEP9 628 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 OR2L8Q8NGY9 312 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SETD6Q8TBK2 473 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PIGOQ8TEQ8 1089 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 DNAJA4Q8WW22 397 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HPSE2Q8WWQ2 592 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATL1Q8WXF7 558 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 RCN3Q96D15 328 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MSI2Q96DH6 328 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TRERF1Q96PN7 1200 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NDNQ99608 321 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CINPQ9BW66 212 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 JAM3Q9BX67 310 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PECRQ9BY49 303 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CST11Q9H112 138 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATXN3LQ9H3M9 355 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 LDAHQ9H6V9 325 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 S100A14Q9HCY8 104 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NGRNQ9NPE2 291 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PCDH12Q9NPG4 1184 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ZDHHC4Q9NPG8 344 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC39A9Q9NUM3 307 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NCDNQ9UBB6 729 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GPN3Q9UHW5 284 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SLC24A2Q9UI40 661 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MUTYHQ9UIF7 546 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 POU2F3Q9UKI9 436 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CBLCQ9ULV8 474 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ANAPC10Q9UM13 185 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 PPT2Q9UMR5 302 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 MAN2B2Q9Y2E5 1009 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 KLK4Q9Y5K2 254 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 V9GYQ6 96 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FLNAP21333 2647 aaKnown RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM25AB3EWG3 89 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM25CB3EWG5 89 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 FAM25GB3EWG6 89 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 C9J4A7 227 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CCDC188H7C350 402 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CACNB4O00305 520 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 ATXN7O15265 892 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 SHOXO15266 292 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 TM9SF1O15321 606 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 HOXC11O43248 304 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 NDUFS3O75489 264 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 REM1O75628 298 aa1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 CRTAPO75718 401 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC13-211ENST00000512009 GRAP2O75791 330 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms