RNA–Protein interactions for RNA: ENST00000511263.1

HMGB3P13-201, Transcript of high mobility group box 3 pseudogene 13, humanhuman

BASIC

Gene HMGB3P13, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P13-201ENST00000511263 IFNAR1P17181 557 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CAPN3P20807 821 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RPA1P27694 616 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PSMA5P28066 241 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 MARCKSP29966 332 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 UGT2B10P36537 528 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CD79BP40259 229 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PNPLA4P41247 253 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SLC1A4P43007 532 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ALDH3B2P48448 385 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SERPINH1P50454 418 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PGGT1BP53609 377 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM3BP58499 235 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ACTR2P61160 394 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 MAT1AQ00266 395 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PTGR1Q14914 329 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SMAD1Q15797 465 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ALG11Q2TAA5 492 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PLK5Q496M5 336 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZFP69Q49AA0 526 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SLC45A4Q5BKX6 768 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RARS2Q5T160 578 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 UBAP2Q5T6F2 1119 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM268Q5VZI3 342 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 KRT79Q5XKE5 535 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 AWAT2Q6E213 333 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ITPRIPL1Q6GPH6 555 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 NANOGP8Q6NSW7 305 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 KLHL24Q6TFL4 600 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CLEC2AQ6UVW9 174 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GPRIN3Q6ZVF9 776 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ENOSF1Q7L5Y1 443 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GALNTL5Q7Z4T8 443 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 MDGA2Q7Z553 956 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PIP4P1Q86T03 277 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TAC4Q86UU9 113 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GPR180Q86V85 440 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 MOGAT3Q86VF5 341 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 HIPK1Q86Z02 1210 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 HERC6Q8IVU3 1022 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RNF113BQ8IZP6 322 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM199Q8N511 208 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZBTB44Q8NCP5 570 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 AGBL3Q8NEM8 1001 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 OR5T1Q8NG75 326 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 URGCPQ8TCY9 931 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 BLOC1S5Q8TDH9 187 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TCP10LQ8TDR4 215 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TMEM174Q8WUU8 243 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 DNAJA4Q8WW22 397 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RFFLQ8WZ73 363 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GTF3AQ92664 365 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 KCNJ9Q92806 393 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TBRG4Q969Z0 631 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CPNE4Q96A23 557 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 C9orf72Q96LT7 481 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF597Q96LX8 424 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 MAGEB18Q96M61 343 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PPM1MQ96MI6 270 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TCEANC2Q96MN5 208 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 PPP1R2P1Q96PQ5 205 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 FRG2BQ96QU4 278 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 CCNL2Q96S94 520 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ACPTQ9BZG2 426 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 RACGAP1Q9H0H5 632 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 BOLA2Q9H3K6 86 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 OSGEPL1Q9H4B0 414 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GAREM1Q9H706 876 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SMYD3Q9H7B4 428 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 TDRD3Q9H7E2 651 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 JMJD4Q9H9V9 463 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF556Q9HAH1 456 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 AGPAT3Q9NRZ7 376 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 HIF1ANQ9NWT6 349 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GLTPQ9NZD2 209 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 KCND2Q9NZV8 630 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 IFT80Q9P2H3 777 aaPredicted RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 EIF3KQ9UBQ5 218 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM153AQ9UHL3 310 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 BCAP29Q9UHQ4 241 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 AGO1Q9UL18 857 aaKnown RBP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 DHDHQ9UQ10 334 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 GDAQ9Y2T3 454 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SNX24Q9Y343 169 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 SBDSQ9Y3A5 250 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 NFS1Q9Y697 457 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 V9GYQ6 96 aa4.46□□□□□ -1.7
HMGB3P13-201ENST00000511263 UBR2Q8IWV8 1755 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 C5P01031 1676 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 NHSQ6T4R5 1651 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PSME4Q14997 1843 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 FAM47DPA6NHR8 397 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 SAGE2PA6NJ88 616 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 CD8B2A6NJW9 211 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 ZNF814B7Z6K7 855 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 DDX39AO00148 427 aaKnown RBP4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 MDM4O15151 490 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 MED24O75448 989 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 RAB3DO95716 219 aa4.45□□□□□ -1.7
HMGB3P13-201ENST00000511263 PTTG1O95997 202 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms