RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 CDK2AP1O14519 115 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 TAPBPO15533 448 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 PIAS1O75925 651 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 ELK3P41970 407 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 CLCN2P51788 898 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 PMPCAQ10713 525 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 PDAP1Q13442 181 aaKnown RBP14.79□□□□□ -0.04
RAB40C-202ENST00000509637 ZNF750Q32MQ0 723 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 BBS9Q3SYG4 887 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 FBXO48Q5FWF7 155 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 CLNKQ7Z7G1 428 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 DMRTC2Q8IXT2 367 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-202ENST00000509637 POGLUT1Q8NBL1 392 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 CHTF18Q8WVB6 975 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 TMEM125Q96AQ2 219 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 SEC16BQ96JE7 1060 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 PBKQ96KB5 322 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 CLK4Q9HAZ1 481 aaKnown RBP14.79□□□□□ -0.04
RAB40C-202ENST00000509637 SEMA4BQ9NPR2 832 aaPredicted RBP14.79□□□□□ -0.04
RAB40C-202ENST00000509637 PNPLA3Q9NST1 481 aa14.79□□□□□ -0.04
RAB40C-202ENST00000509637 LRIT2A6NDA9 550 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 FAM166BA8MTA8 275 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 KLRC4-KLRK1H3BQV0 150 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 DIAPH2O60879 1101 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 OR2J2O76002 312 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 WISP3O95389 354 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-202ENST00000509637 CELA3AP09093 270 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 ZNF37AP17032 561 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-202ENST00000509637 CD22P20273 847 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 MSX1P28360 303 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 GMPRP36959 345 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 SOX3P41225 446 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 SLC6A12P48065 614 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 TAS2R39P59534 338 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 GXYLT1Q4G148 440 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 STEAP4Q687X5 459 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 UBE3DQ7Z6J8 389 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 FAM47BQ8NA70 645 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 PSD4Q8NDX1 1056 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 TRPV3Q8NET8 790 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 OR2M7Q8NG81 312 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 PTPMT1Q8WUK0 201 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-202ENST00000509637 ESAMQ96AP7 390 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 CFAP36Q96G28 342 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 AIF1LQ9BQI0 150 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 MCMBPQ9BTE3 642 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 DDX47Q9H0S4 455 aaKnown RBP14.78□□□□□ -0.04
RAB40C-202ENST00000509637 ZDHHC11Q9H8X9 412 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 PRTFDC1Q9NRG1 225 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 SMYD2Q9NRG4 433 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 ZNF490Q9ULM2 529 aaPredicted RBP14.78□□□□□ -0.04
RAB40C-202ENST00000509637 CHMP2BQ9UQN3 213 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 MMACHCQ9Y4U1 282 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 FAM215AQ9Y5M1 114 aa14.78□□□□□ -0.04
RAB40C-202ENST00000509637 NPIPA2E9PIF3 369 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 NPIPA3F8WFD2 350 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 WWP2O00308 870 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 FCHO1O14526 889 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 GLSO94925 669 aaPredicted RBP14.77□□□□□ -0.05
RAB40C-202ENST00000509637 C1GALT1C1LP0DN25 315 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 EPORP19235 508 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 FOXO1Q12778 655 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 SNTB1Q13884 538 aaKnown RBP14.77□□□□□ -0.05
RAB40C-202ENST00000509637 TSNQ15631 228 aaKnown RBP14.77□□□□□ -0.05
RAB40C-202ENST00000509637 FAM45BPQ6NSW5 357 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 IL20RBQ6UXL0 311 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 KLHDC8AQ8IYD2 350 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 SLC35F6Q8N357 371 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 TMEM156Q8N614 296 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 OR5M9Q8NGP3 310 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 FAM45AQ8TCE6 357 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 RHBDF1Q96CC6 855 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 VMP1Q96GC9 406 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 RASL10BQ96S79 203 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 OSBPL9Q96SU4 736 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 TMEM79Q9BSE2 394 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 LIME1Q9H400 295 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 TEX264Q9Y6I9 313 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 NF1P21359 2839 aa14.77□□□□□ -0.05
RAB40C-202ENST00000509637 PSMD12O00232 456 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 PGRMC1O00264 195 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ERI3O43414 337 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 TTC4O95801 387 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 HOXD4P09016 255 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ENO2P09104 434 aaPredicted RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ADH7P40394 386 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 FNTAP49354 379 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 SSR4P51571 173 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 HK2P52789 917 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 RAB38P57729 211 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 PPIAP62937 165 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 SLBPQ14493 270 aaKnown RBP eCLIP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 FASTKD3Q14CZ7 662 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ADPRMQ3LIE5 342 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ADGRD1Q6QNK2 874 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ZNF793Q6ZN11 406 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ZC3HC1Q86WB0 502 aaKnown RBP14.76□□□□□ -0.05
RAB40C-202ENST00000509637 SPATA6LQ8N4H0 392 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ACTRT1Q8TDG2 376 aa14.76□□□□□ -0.05
RAB40C-202ENST00000509637 ATL1Q8WXF7 558 aa14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms