RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 GRHL2Q6ISB3 625 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF793Q6ZN11 406 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 FRMD7Q6ZUT3 714 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ABHD13Q7L211 337 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ZC3H7AQ8IWR0 971 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CISD2Q8N5K1 135 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 OR7G3Q8NG95 312 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 OR5T3Q8NGG3 340 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 OR51Q1Q8NH59 317 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 DNAJB14Q8TBM8 379 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NT5CQ8TCD5 201 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 UTP15Q8TED0 518 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 AGAP11Q8TF27 550 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF473Q8WTR7 871 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CCT6BQ92526 530 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 MIB2Q96AX9 1013 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 PTCD3Q96EY7 689 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 MAGEB10Q96LZ2 347 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 QRFPRQ96P65 431 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 HBEGFQ99075 208 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NTMT1Q9BV86 223 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 MS4A8Q9BY19 250 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 SLC29A3Q9BZD2 475 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 SHCBP1LQ9BZQ2 653 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 TGIF2Q9GZN2 237 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 RHBGQ9H310 441 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CENPHQ9H3R5 247 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 EHD1Q9H4M9 534 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 CNOT10Q9H9A5 744 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 RIC8BQ9NVN3 520 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 C19orf25Q9UFG5 118 aaPredicted RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 ZFP69BQ9UJL9 534 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NAALAD2Q9Y3Q0 740 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 PTGDR2Q9Y5Y4 395 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 MED13Q9UHV7 2174 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 FLNBO75369 2602 aaKnown RBP8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 NBASA2RRP1 2371 aa8.25□□□□□ -1.09
PDLIM5-213ENST00000509357 DYTNA2CJ06 578 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 LRIT2A6NDA9 550 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 H3BQF6 201 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SAP18O00422 153 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 RTCAO00442 366 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 PCDH17O14917 1159 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CLGNO14967 610 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SMIM24O75264 130 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 JRKO75564 520 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 LYPLA1O75608 230 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SUPT7LO94864 414 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SORBS2O94875 1100 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 BMP10O95393 424 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 BPGMP07738 259 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ZNF888P0CJ79 500 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 MYL2P10916 166 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 COX6A1P12074 109 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ICAM2P13598 275 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CPA3P15088 417 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 EPB42P16452 691 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SERPINB4P48594 390 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CD97P48960 835 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 HNRNPFP52597 415 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 DNAJB13P59910 316 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 RAB8AP61006 207 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 AP2B1P63010 937 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 OLR1P78380 273 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ARG2P78540 354 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 IRF8Q02556 426 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ZRSR2Q15696 482 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CCDC153Q494R4 210 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 DEFB134Q4QY38 66 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 NIPAL1Q6NVV3 410 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ISLR2Q6UXK2 745 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 TMIGD1Q6UXZ0 262 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 RIPOR1Q6ZS17 1223 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SIRT6Q8N6T7 355 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 GALNT11Q8NCW6 608 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 TMEM52Q8NDY8 209 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 TRPV3Q8NET8 790 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 HUS1BQ8NHY5 278 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 UCN3Q969E3 161 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 MS4A6EQ96DS6 147 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 PEX11GQ96HA9 241 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SMC6Q96SB8 1091 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 WDR77Q9BQA1 342 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CAPS2Q9BXY5 557 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 RBCK1Q9BYM8 510 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 TUBB1Q9H4B7 451 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 NT5DC2Q9H857 520 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ZBTB20Q9HC78 741 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SSU72Q9NP77 194 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 DMRT3Q9NQL9 472 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 PTGFRNQ9P2B2 879 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 TIMM22Q9Y584 194 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 CLDN16Q9Y5I7 305 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 ACTL7BQ9Y614 415 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 COPG1Q9Y678 874 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 SLC22A7Q9Y694 548 aa8.24□□□□□ -1.09
PDLIM5-213ENST00000509357 IGHV1-45A0A0A0MS14 117 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 IGHV3-20A0A0C4DH32 117 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 TMEM120BA0PK00 339 aa8.23□□□□□ -1.09
PDLIM5-213ENST00000509357 WDR91A4D1P6 747 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms