RNA–Protein interactions for RNA: ENST00000508290.5

SFXN1-209, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 592 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-209ENST00000508290 FAM153BP0C7A2 387 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 PCNAP12004 261 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 TAS2R50P59544 299 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 ARG2P78540 354 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 ZNF169Q14929 603 aaPredicted RBP18.68■□□□□ 0.58
SFXN1-209ENST00000508290 PLEKHN1Q494U1 663 aaPredicted RBP18.68■□□□□ 0.58
SFXN1-209ENST00000508290 FAM153CQ494X1 144 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 KHDRBS2Q5VWX1 349 aaKnown RBP18.68■□□□□ 0.58
SFXN1-209ENST00000508290 H3F3CQ6NXT2 135 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 LINC00696Q6ZRV3 163 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 MYLK4Q86YV6 388 aaPredicted RBP18.68■□□□□ 0.58
SFXN1-209ENST00000508290 L3MBTL4Q8NA19 623 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 ZNF354BQ96LW1 612 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 ZBTB20Q9HC78 741 aaPredicted RBP18.68■□□□□ 0.58
SFXN1-209ENST00000508290 PPT2Q9UMR5 302 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 DAPP1Q9UN19 280 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 PCDHGA10Q9Y5H3 936 aa18.68■□□□□ 0.58
SFXN1-209ENST00000508290 C4orf51C9J302 202 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 CLDN9O95484 217 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 B3GALT4O96024 378 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 GSTA1P08263 222 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 TAC1P20366 129 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 PTX3P26022 381 aaPredicted RBP18.67■□□□□ 0.58
SFXN1-209ENST00000508290 GCAP28676 217 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 INAQ16352 499 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 AP5B1Q2VPB7 878 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 RPUSD3Q6P087 351 aaKnown RBP18.67■□□□□ 0.58
SFXN1-209ENST00000508290 GOLGA7Q7Z5G4 137 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 SLC5A8Q8N695 610 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 F2RL3Q96RI0 385 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 NTMT1Q9BV86 223 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 C1QTNF3Q9BXJ4 246 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 PRDM7Q9NQW5 492 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 AGPAT4Q9NRZ5 378 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 MS4A12Q9NXJ0 267 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 PLAAQ9Y263 795 aa18.67■□□□□ 0.58
SFXN1-209ENST00000508290 TRAV17A0A0B4J275 112 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 ITGAMP11215 1152 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 HIST1H1TP22492 207 aaPredicted RBP18.66■□□□□ 0.58
SFXN1-209ENST00000508290 EEF1DP29692 281 aaKnown RBP18.66■□□□□ 0.58
SFXN1-209ENST00000508290 SLC26A5P58743 744 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 CUL3Q13618 768 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 RASA2Q15283 850 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 IGFBP7Q16270 282 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 DEPDC1Q5TB30 811 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 SCUBE1Q8IWY4 988 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 SIRT6Q8N6T7 355 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 HUS1BQ8NHY5 278 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 SUN3Q8TAQ9 357 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 TSLPQ969D9 159 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 ATP6V1E2Q96A05 226 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 RGMAQ96B86 450 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 KCNK13Q9HB14 408 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 PRTFDC1Q9NRG1 225 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 ZNF358Q9NW07 568 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 TENM4Q6N022 2769 aa18.66■□□□□ 0.58
SFXN1-209ENST00000508290 TNRC6AQ8NDV7 1962 aaKnown RBP18.66■□□□□ 0.58
SFXN1-209ENST00000508290 IGHV3-20A0A0C4DH32 117 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 SAGE2PA6NJ88 616 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 FOXE1O00358 373 aaPredicted RBP18.65■□□□□ 0.58
SFXN1-209ENST00000508290 DNAJB6O75190 326 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 SIX3O95343 332 aaPredicted RBP18.65■□□□□ 0.58
SFXN1-209ENST00000508290 CERS1P27544 350 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 SSR2P43308 183 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 TNFSF10P50591 281 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 CCNG1P51959 295 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 RAP1GDS1P52306 607 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 LIM2P55344 173 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 SLC13A2Q13183 592 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 RUNX2Q13950 521 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 MEP1AQ16819 746 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 GGTA1PQ4G0N0 100 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 COLEC12Q5KU26 742 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 ADNP2Q6IQ32 1131 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 CUZD1Q86UP6 607 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 TDRPQ86YL5 185 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 ACOT4Q8N9L9 421 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 PHF21BQ96EK2 531 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 EPB41L4BQ9H329 900 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 NOL11Q9H8H0 719 aaKnown RBP18.65■□□□□ 0.58
SFXN1-209ENST00000508290 DMRT3Q9NQL9 472 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 PCTPQ9UKL6 214 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 STK38LQ9Y2H1 464 aa18.65■□□□□ 0.58
SFXN1-209ENST00000508290 COPG1Q9Y678 874 aaKnown RBP18.65■□□□□ 0.58
SFXN1-209ENST00000508290 OR5H15A6NDH6 313 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 OR2W5A6NFC9 320 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 ZNF500O60304 480 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 CTNSO60931 367 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 OTCP00480 354 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 TGFB1P01137 390 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 RPS17P08708 135 aaKnown RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 MAOAP21397 527 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 ATP5A1P25705 553 aaKnown RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 ARL1P40616 181 aaPredicted RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 BTG2P78543 158 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 ZNF33BQ06732 778 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 BIKQ13323 160 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 ZCCHC7Q8N3Z6 543 aaKnown RBP18.64■□□□□ 0.57
SFXN1-209ENST00000508290 LRRN4CLQ8ND94 238 aa18.64■□□□□ 0.57
SFXN1-209ENST00000508290 MYRIPQ8NFW9 859 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms