RNA–Protein interactions for RNA: ENST00000508274.5

RAB28-205, Transcript of RAB28, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB28, Length 1,551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-205ENST00000508274 SUPT3HO75486 399 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 NEURL1O76050 574 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 S100BP04271 92 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 LTA4HP09960 611 aaKnown RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 TPP2P29144 1249 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 IRF9Q00978 393 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 OC90Q02509 493 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 CHIT1Q13231 466 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 LRRC70Q7Z2Q7 622 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 TBC1D1Q86TI0 1168 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 RPS19BP1Q86WX3 136 aaKnown RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 SCUBE1Q8IWY4 988 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 OR2L5Q8NG80 312 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 KCTD4Q8WVF5 259 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 NXNL1Q96CM4 212 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 SCMH1Q96GD3 660 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 F2RL3Q96RI0 385 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 CD244Q9BZW8 370 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 PITHD1Q9GZP4 211 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 TSPAN10Q9H1Z9 355 aaPredicted RBP13.36□□□□□ -0.27
RAB28-205ENST00000508274 NUDT4Q9NZJ9 180 aa13.36□□□□□ -0.27
RAB28-205ENST00000508274 HMX2A2RU54 273 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 KERAO60938 352 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 MYO1DO94832 1006 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 CRYABP02511 175 aaKnown RBP13.35□□□□□ -0.27
RAB28-205ENST00000508274 MYBL2P10244 700 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 GSTM2P28161 218 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 RAB38P57729 211 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 IRF8Q02556 426 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 NOTCH2Q04721 2471 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
RAB28-205ENST00000508274 NAB1Q13506 487 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 MROH9Q5TGP6 573 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 TRIM40Q6P9F5 258 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 ABHD17CQ6PCB6 329 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 GALNTL5Q7Z4T8 443 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 CLNKQ7Z7G1 428 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 CENPLQ8N0S6 344 aaPredicted RBP13.35□□□□□ -0.27
RAB28-205ENST00000508274 LGI4Q8N135 537 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 APCDD1LQ8NCL9 501 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 DNAJB8Q8NHS0 232 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 STAG3L4Q8TBR4 150 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 EFCAB11Q9BUY7 163 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 NPLQ9BXD5 320 aaPredicted RBP13.35□□□□□ -0.27
RAB28-205ENST00000508274 NMRAL1Q9HBL8 299 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 PRTFDC1Q9NRG1 225 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 PNO1Q9NRX1 252 aaKnown RBP13.35□□□□□ -0.27
RAB28-205ENST00000508274 LRFN1Q9P244 771 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 SEC14L3Q9UDX4 400 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 MMACHCQ9Y4U1 282 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 PCDHGB6Q9Y5F9 930 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 ITPR2Q14571 2701 aa13.35□□□□□ -0.27
RAB28-205ENST00000508274 TRBV11-1A0A0K0K1C0 115 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 MYOCOSA0A1B0GUC4 107 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 B3GALT2O43825 422 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SH3BGRLO75368 114 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 URI1O94763 535 aaPredicted RBP13.34□□□□□ -0.27
RAB28-205ENST00000508274 MTHFD2P13995 350 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 CRABP2P29373 138 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 EEF1DP29692 281 aaKnown RBP13.34□□□□□ -0.27
RAB28-205ENST00000508274 MSH2P43246 934 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 LIM2P55344 173 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 MLF1P58340 268 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SLC13A2Q13183 592 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 E2F2Q14209 437 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 ZNF793Q6ZN11 406 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 UBE3DQ7Z6J8 389 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 ZNF227Q86WZ6 799 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 ARMC2Q8NEN0 867 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 THAP3Q8WTV1 239 aaPredicted RBP13.34□□□□□ -0.27
RAB28-205ENST00000508274 UBTD2Q8WUN7 234 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SEC16BQ96JE7 1060 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 FRMD6Q96NE9 622 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SERINC2Q96SA4 455 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 PRDM7Q9NQW5 492 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SNX15Q9NRS6 342 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 NINJ2Q9NZG7 142 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 SH3BGRL2Q9UJC5 107 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 ZNF223Q9UK11 482 aaPredicted RBP13.34□□□□□ -0.27
RAB28-205ENST00000508274 DAPP1Q9UN19 280 aa13.34□□□□□ -0.27
RAB28-205ENST00000508274 A0A088AWK7 358 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 RTCAO00442 366 aaKnown RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 CYR61O00622 381 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 C2P06681 752 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 SP1P08047 785 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 CD46P15529 392 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 ZNF10P21506 573 aaPredicted RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 DCTP40126 519 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 MTTPP55157 894 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 PER3P56645 1201 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 ZRSR2Q15696 482 aaKnown RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 TBCCQ15814 346 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 UAP1Q16222 522 aaPredicted RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 RNF175Q8N4F7 328 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 B3GNT7Q8NFL0 401 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 ZNF473Q8WTR7 871 aaKnown RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 MS4A8Q9BY19 250 aa13.33□□□□□ -0.28
RAB28-205ENST00000508274 COPS7BQ9H9Q2 264 aaPredicted RBP13.33□□□□□ -0.28
RAB28-205ENST00000508274 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms