RNA–Protein interactions for RNA: ENST00000508249.1

UBE2D3-223, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 604 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-223ENST00000508249 MRRFQ96E11 262 aaKnown RBP8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 WDR34Q96EX3 536 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 PTCD3Q96EY7 689 aaKnown RBP8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 THOC3Q96J01 351 aaKnown RBP8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 MAGEB10Q96LZ2 347 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 C10orf90Q96M02 699 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 CD244Q9BZW8 370 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 TGIF2Q9GZN2 237 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 VPS11Q9H270 941 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 ANKHQ9HCJ1 492 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 NPDC1Q9NQX5 325 aaPredicted RBP8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 PLA2G3Q9NZ20 509 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 OPTCQ9UBM4 332 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 CTSFQ9UBX1 484 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 SEC14L3Q9UDX4 400 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 ADGRE2Q9UHX3 823 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 PCDHGB6Q9Y5F9 930 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 ANK2Q01484 3957 aa8.68□□□□□ -1.02
UBE2D3-223ENST00000508249 NCF1BA6NI72 391 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 NCF1CA8MVU1 366 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TRIM49D1C9J1S8 452 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 STX16-NPEPL1H3BU86 382 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 K7EPI3 171 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 STX16O14662 325 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 OR1F1O43749 312 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 KLK8O60259 260 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SMIM24O75264 130 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SERPINA6P08185 405 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 CELA2AP08217 269 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 GSTA1P08263 222 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 GFAPP14136 432 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 NCF1P14598 390 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 EPB42P16452 691 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 BCL6P41182 706 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 CASP2P42575 452 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 HSPA7P48741 367 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 NAA20P61599 178 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 STXBP1P61764 594 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 YBX1P67809 324 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TFF3Q07654 80 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TGM3Q08188 693 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SLC29A2Q14542 456 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 PCBP2Q15366 365 aaKnown RBP eCLIP8.67□□□□□ -1.028e-8■■■□□ 15.4
UBE2D3-223ENST00000508249 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 HKDC1Q2TB90 917 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TUBB8Q3ZCM7 444 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 C10orf62Q5T681 223 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 WDR93Q6P2C0 686 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TMIGD1Q6UXZ0 262 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 MEX3BQ6ZN04 569 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SLCO4C1Q6ZQN7 724 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SHISA6Q6ZSJ9 500 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 RTTNQ86VV8 2226 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 RIBC1Q8N443 379 aaPredicted RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SPATA6LQ8N4H0 392 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 ARHGEF39Q8N4T4 335 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SNX31Q8N9S9 440 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 SRFBP1Q8NEF9 429 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 C7orf57Q8NEG2 295 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 CHTF18Q8WVB6 975 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 LMF1Q96S06 567 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 DMRTA2Q96SC8 542 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 FOXC2Q99958 501 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 MRPL57Q9BQC6 102 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TMEM79Q9BSE2 394 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 ROGDIQ9GZN7 287 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 MRPL46Q9H2W6 279 aaKnown RBP8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 MEMO1Q9Y316 297 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 MXRA5Q9NR99 2828 aa8.67□□□□□ -1.02
UBE2D3-223ENST00000508249 TRAV17A0A0B4J275 112 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 A0A1W2PQ72 361 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 KIAA1324LA8MWY0 1029 aaPredicted RBP8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 MAP2K7O14733 419 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 TAPBPO15533 448 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 P2RX6O15547 441 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 NDUFS4O43181 175 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 ZNHIT1O43257 154 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 NRP2O60462 931 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 CCNT2O60583 730 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 CDH16O75309 829 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 CLEC3AO75596 197 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 MED26O95402 600 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 F10P00742 488 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 ALOX12P18054 663 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 TAC1P20366 129 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 HNF4AP41235 474 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 PHEXP78562 749 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 IRF8Q02556 426 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 DLG1Q12959 904 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 RCN2Q14257 317 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 SLBPQ14493 270 aaKnown RBP eCLIP8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 RBBP5Q15291 538 aaKnown RBP8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 RBBP7Q16576 425 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 TECRLQ5HYJ1 363 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 CATSPEREQ5SY80 951 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 PLD3Q8IV08 490 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 SPNS2Q8IVW8 549 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 HOMEZQ8IX15 550 aa8.66□□□□□ -1.02
UBE2D3-223ENST00000508249 AFAP1L2Q8N4X5 818 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms