RNA–Protein interactions for RNA: ENST00000507944.5

CLDND1-216, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-216ENST00000507944 OR2L5Q8NG80 312 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 MARVELD3Q96A59 401 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 KIAA1191Q96A73 305 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 UBXN10Q96LJ8 280 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 QRFPRQ96P65 431 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 REXO4Q9GZR2 422 aaKnown RBP19.46■□□□□ 0.71
CLDND1-216ENST00000507944 PRTFDC1Q9NRG1 225 aa19.46■□□□□ 0.71
CLDND1-216ENST00000507944 PNO1Q9NRX1 252 aaKnown RBP19.46■□□□□ 0.71
CLDND1-216ENST00000507944 PTBP2Q9UKA9 531 aaKnown RBP19.46■□□□□ 0.71
CLDND1-216ENST00000507944 ZNF490Q9ULM2 529 aaPredicted RBP19.46■□□□□ 0.71
CLDND1-216ENST00000507944 TRBV11-1A0A0K0K1C0 115 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 FCHO1O14526 889 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 NME2P1O60361 137 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 MYO1DO94832 1006 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TBX6O95947 436 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 C1QAP02745 245 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 NME2P22392 152 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TRHRP34981 398 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 SPRP35270 261 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 CLCN2P51788 898 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 PLTPP55058 493 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 HSD17B7P56937 341 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 RAB10P61026 200 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 DOC2AQ14183 400 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TERF2Q15554 542 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ZKSCAN8Q15776 578 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ADPRMQ3LIE5 342 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 GRTP1Q5TC63 336 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TRIM40Q6P9F5 258 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 RPTNQ6XPR3 784 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ZNF227Q86WZ6 799 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TICAM1Q8IUC6 712 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 SIAH3Q8IW03 269 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ARMC10Q8N2F6 343 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ZNF808Q8N4W9 903 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 APCDD1LQ8NCL9 501 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 TMEM125Q96AQ2 219 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 WDR34Q96EX3 536 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 PTCD3Q96EY7 689 aaKnown RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 MAGED4Q96JG8 741 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 RNF112Q9ULX5 631 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 MRPS33Q9Y291 106 aaKnown RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ZNF835Q9Y2P0 537 aa19.45■□□□□ 0.7
CLDND1-216ENST00000507944 UTP11Q9Y3A2 253 aaKnown RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 KLF2Q9Y5W3 355 aaPredicted RBP19.45■□□□□ 0.7
CLDND1-216ENST00000507944 ABCA12Q86UK0 2595 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 ASNA1O43681 348 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 HNRNPFP52597 415 aaKnown RBP19.44■□□□□ 0.7
CLDND1-216ENST00000507944 SLC13A2Q13183 592 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 PDK4Q16654 411 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 ADNP2Q6IQ32 1131 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 ABHD17CQ6PCB6 329 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 SPPL2CQ8IUH8 684 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 ZNF595Q8IYB9 648 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 FAM47BQ8NA70 645 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 PDPRQ8NCN5 879 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 TMEM52Q8NDY8 209 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 ADAMTS18Q8TE60 1221 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 SERINC2Q96SA4 455 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 EFCAB11Q9BUY7 163 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 TINAGQ9UJW2 476 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 FBXW2Q9UKT8 454 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 CLDN16Q9Y5I7 305 aa19.44■□□□□ 0.7
CLDND1-216ENST00000507944 NCOA6Q14686 2063 aaPredicted RBP19.44■□□□□ 0.7
CLDND1-216ENST00000507944 CACNA1CQ13936 2221 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 TGFBR3LH3BV60 316 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CCNT2O60583 730 aaKnown RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 S100BP04271 92 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 ESRRAP11474 423 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CD22P20273 847 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 PPP2R1BP30154 601 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CASQ1P31415 396 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 KCNC1P48547 511 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 MTTPP55157 894 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 LIM2P55344 173 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CAV1Q03135 178 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 LAPTM5Q13571 262 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 HIST2H2ACQ16777 129 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 KBTBD12Q3ZCT8 623 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 HIST2H2AA3Q6FI13 130 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 Q6ZPB1 254 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CPSF7Q8N684 471 aaKnown RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 PPM1NQ8N819 430 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 STAG3L4Q8TBR4 150 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 EXT2Q93063 718 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 VMP1Q96GC9 406 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 F2RL3Q96RI0 385 aa19.43■□□□□ 0.7
CLDND1-216ENST00000507944 COPS7BQ9H9Q2 264 aaPredicted RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 PPIEQ9UNP9 301 aaKnown RBP19.43■□□□□ 0.7
CLDND1-216ENST00000507944 CYR61O00622 381 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 FAM155BO75949 473 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 ZNF24P17028 368 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 CERS1P27544 350 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 GRNP28799 593 aaKnown RBP19.42■□□□□ 0.7
CLDND1-216ENST00000507944 GMPRP36959 345 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 MAGEA4P43358 317 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 GPR143P51810 404 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 IRF8Q02556 426 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 TGM3Q08188 693 aa19.42■□□□□ 0.7
CLDND1-216ENST00000507944 CHIT1Q13231 466 aa19.42■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms