RNA–Protein interactions for RNA: ENST00000507655.5

SSBP2-208, Transcript of single stranded DNA binding protein 2, humanhuman

TSL 5

Gene SSBP2, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP2-208ENST00000507655 SOX11P35716 441 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 SLCO1A2P46721 670 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 CCNG1P51959 295 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 LIM2P55344 173 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 TRAF3Q13114 568 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 CPSF6Q16630 551 aaKnown RBP eCLIP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 SFT2D3Q587I9 215 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 CRB2Q5IJ48 1285 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 DEPDC1Q5TB30 811 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 KHDRBS2Q5VWX1 349 aaKnown RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ISLR2Q6UXK2 745 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ZNF793Q6ZN11 406 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 RNF175Q8N4F7 328 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ZADH2Q8N4Q0 377 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 WDR20Q8TBZ3 569 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 BRIX1Q8TDN6 353 aaKnown RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ADAMTS18Q8TE60 1221 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ZNF483Q8TF39 744 aaPredicted RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 AENQ8WTP8 325 aaKnown RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 REPS1Q96D71 796 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 PTCHD1Q96NR3 888 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 LMF1Q96S06 567 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 MFRPQ9BY79 579 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 ROGDIQ9GZN7 287 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 COPS7BQ9H9Q2 264 aaPredicted RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 PRDM9Q9NQV7 894 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 DAPP1Q9UN19 280 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 MMACHCQ9Y4U1 282 aa16.94■□□□□ 0.3
SSBP2-208ENST00000507655 PRRC2CQ9Y520 2896 aaKnown RBP16.94■□□□□ 0.3
SSBP2-208ENST00000507655 TCRBV16S1A1N1A0A5B0 115 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 TAC1P20366 129 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 ARFIP1P53367 373 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 MFAP5Q13361 173 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 DDX39BQ13838 428 aaKnown RBP16.93■□□□□ 0.3
SSBP2-208ENST00000507655 GGTA1PQ4G0N0 100 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 PAPD4Q6PIY7 484 aaKnown RBP16.93■□□□□ 0.3
SSBP2-208ENST00000507655 Q6ZS92 163 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 RPS27LQ71UM5 84 aaKnown RBP16.93■□□□□ 0.3
SSBP2-208ENST00000507655 SCUBE1Q8IWY4 988 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 CYP4X1Q8N118 509 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 EPS8L3Q8TE67 593 aaKnown RBP16.93■□□□□ 0.3
SSBP2-208ENST00000507655 PPP4R1Q8TF05 950 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 ATP6V1E2Q96A05 226 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 CDK15Q96Q40 435 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 MTERF1Q99551 399 aaKnown RBP16.93■□□□□ 0.3
SSBP2-208ENST00000507655 LPAR4Q99677 370 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 OR51B5Q9H339 312 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 EPS8L2Q9H6S3 715 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 LYRM4Q9HD34 91 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 NECTIN3Q9NQS3 549 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 PSD3Q9NYI0 1048 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 KCMF1Q9P0J7 381 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 DCDC2Q9UHG0 476 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 PPT2Q9UMR5 302 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 B3GNT3Q9Y2A9 372 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 CLDN16Q9Y5I7 305 aa16.93■□□□□ 0.3
SSBP2-208ENST00000507655 FOXO6A8MYZ6 492 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 PYCARD-AS1I3L0S3 204 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 FOXE1O00358 373 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 RTCAO00442 366 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 CYR61O00622 381 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 DLX3O60479 287 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 CDH16O75309 829 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 GLRA3O75311 464 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 SH3BGRLO75368 114 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 NUDT17P0C025 328 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 MAOAP21397 527 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 HIST1H1TP22492 207 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ATP5A1P25705 553 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 TSFMP43897 325 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 HNRNPFP52597 415 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 MLLT10P55197 1068 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 HSD17B7P56937 341 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 OR4D2P58180 307 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 RPS13P62277 151 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 HERVK_113P63132 956 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 PHEXP78562 749 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ACTN3Q08043 901 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ESPL1Q14674 2120 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ZRSR2Q15696 482 aaKnown RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 EXT1Q16394 746 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 BTBD16Q32M84 506 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 PLEKHN1Q494U1 663 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 H3F3CQ6NXT2 135 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 EMBQ6PCB8 327 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 SIRT6Q8N6T7 355 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ACOT4Q8N9L9 421 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 TMEM52Q8NDY8 209 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 M1APQ8TC57 530 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ERVK-6Q9BXR3 956 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 MMP25Q9NPA2 562 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 SEMA4BQ9NPR2 832 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 PTGFRNQ9P2B2 879 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 CSAG2Q9Y5P2 127 aa16.92■□□□□ 0.3
SSBP2-208ENST00000507655 V9GYY5 206 aaPredicted RBP16.92■□□□□ 0.3
SSBP2-208ENST00000507655 ZGRF1Q86YA3 2104 aa16.91■□□□□ 0.3
SSBP2-208ENST00000507655 RP1L1Q8IWN7 2480 aaPredicted RBP16.91■□□□□ 0.3
SSBP2-208ENST00000507655 SMIM23A6NLE4 172 aa16.91■□□□□ 0.3
SSBP2-208ENST00000507655 TTLL8A6PVC2 850 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms