RNA–Protein interactions for RNA: ENST00000506965.5

DDX41-206, Transcript of DEAD-box helicase 41, humanhuman

TSL 5

Gene DDX41, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-206ENST00000506965 POM121Q96HA1 1249 aa12.43□□□□□ -0.42
DDX41-206ENST00000506965 LIME1Q9H400 295 aa12.43□□□□□ -0.42
DDX41-206ENST00000506965 ZDHHC11Q9H8X9 412 aa12.43□□□□□ -0.42
DDX41-206ENST00000506965 PELI2Q9HAT8 420 aa12.43□□□□□ -0.42
DDX41-206ENST00000506965 PNPLA3Q9NST1 481 aa12.43□□□□□ -0.42
DDX41-206ENST00000506965 KLF13Q9Y2Y9 288 aaPredicted RBP12.43□□□□□ -0.42
DDX41-206ENST00000506965 ABCA4P78363 2273 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 FLNAP21333 2647 aaKnown RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 ANKHD1Q8IWZ3 2542 aaKnown RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 FAM166BA8MTA8 275 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 CYR61O00622 381 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 CDK2AP1O14519 115 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 DNALI1O14645 258 aaPredicted RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 PIAS1O75925 651 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 OR2J2O76002 312 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 GLSO94925 669 aaPredicted RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 SERPINA6P08185 405 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 ZNF37AP17032 561 aaPredicted RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 CD22P20273 847 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 GMPRP36959 345 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 ADH7P40394 386 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 SOX3P41225 446 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 SLC6A12P48065 614 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 IL2P60568 153 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 BTN3A2P78410 334 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 PMPCAQ10713 525 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 FBXO48Q5FWF7 155 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 SPANXN3Q5MJ09 141 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 SLCO4C1Q6ZQN7 724 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 ABHD13Q7L211 337 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 CLNKQ7Z7G1 428 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 GPATCH11Q8N954 259 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 FAM47BQ8NA70 645 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 PSD4Q8NDX1 1056 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 OR2M7Q8NG81 312 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 CHTF18Q8WVB6 975 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 PDLIM5Q96HC4 596 aaKnown RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 MCMBPQ9BTE3 642 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 SEMA4BQ9NPR2 832 aaPredicted RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 PNO1Q9NRX1 252 aaKnown RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 TRMT1Q9NXH9 659 aaKnown RBP12.42□□□□□ -0.42
DDX41-206ENST00000506965 FBXW2Q9UKT8 454 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 PPP2R2CQ9Y2T4 447 aa12.42□□□□□ -0.42
DDX41-206ENST00000506965 LRIT2A6NDA9 550 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 KDM4EB2RXH2 506 aaPredicted RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 TAPBPO15533 448 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 EPORP19235 508 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 ENDOUP21128 410 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 DNAJA1P31689 397 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 ELK3P41970 407 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 CLCN2P51788 898 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 FOXO1Q12778 655 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 PDAP1Q13442 181 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 SNTB1Q13884 538 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 FASTKD3Q14CZ7 662 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 RBBP5Q15291 538 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 TERF2Q15554 542 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 ZNF750Q32MQ0 723 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 STEAP4Q687X5 459 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 LRRC8AQ8IWT6 810 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 KLHDC8AQ8IYD2 350 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 OR5M9Q8NGP3 310 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 PTPMT1Q8WUK0 201 aaPredicted RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 TMEM125Q96AQ2 219 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 RASL10BQ96S79 203 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 TMEM79Q9BSE2 394 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 TTTY12Q9BZ98 90 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 DDX47Q9H0S4 455 aaKnown RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 ZNF490Q9ULM2 529 aaPredicted RBP12.41□□□□□ -0.42
DDX41-206ENST00000506965 CHMP2BQ9UQN3 213 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 VWA7Q9Y334 891 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 MMACHCQ9Y4U1 282 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 TEX264Q9Y6I9 313 aa12.41□□□□□ -0.42
DDX41-206ENST00000506965 DOCK7Q96N67 2140 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 DNHD1Q96M86 4753 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 NPIPA2E9PIF3 369 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 NPIPA3F8WFD2 350 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 KLRC4-KLRK1H3BQV0 150 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 WWP2O00308 870 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 FCHO1O14526 889 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 HOXD4P09016 255 aaPredicted RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 ENO2P09104 434 aaPredicted RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 HIST1H2AGP0C0S8 130 aaPredicted RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 HOXB4P17483 251 aaPredicted RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 HIST1H2ADP20671 130 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 CERS1P27544 350 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 CHRNB4P30926 498 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 SSR4P51571 173 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 HK2P52789 917 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 RAB38P57729 211 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 TAS2R39P59534 338 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 SLBPQ14493 270 aaKnown RBP eCLIP12.4□□□□□ -0.42
DDX41-206ENST00000506965 TSNQ15631 228 aaKnown RBP12.4□□□□□ -0.42
DDX41-206ENST00000506965 ADPRMQ3LIE5 342 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 BBS9Q3SYG4 887 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 GXYLT1Q4G148 440 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 IL20RBQ6UXL0 311 aa12.4□□□□□ -0.42
DDX41-206ENST00000506965 ZNF793Q6ZN11 406 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms