RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 CCDC25Q86WR0 208 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 SIAH3Q8IW03 269 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 ARMC10Q8N2F6 343 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 SNX31Q8N9S9 440 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 PDPRQ8NCN5 879 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 TTLQ8NG68 377 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 FAR2Q96K12 515 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 CD244Q9BZW8 370 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 PITHD1Q9GZP4 211 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 REXO4Q9GZR2 422 aaKnown RBP13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 TSPAN10Q9H1Z9 355 aaPredicted RBP13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 ALG9Q9H6U8 611 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 KCMF1Q9P0J7 381 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 TXNDC16Q9P2K2 825 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 MMACHCQ9Y4U1 282 aa13.45□□□□□ -0.26
CDC42SE2-209ENST00000506419 HMX2A2RU54 273 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ANKDD1BA6NHY2 528 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 NPIPA5E9PKD4 350 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CCL21O00585 134 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PRKNO60260 465 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CCNT2O60583 730 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 MYO1DO94832 1006 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 EEF1DP29692 281 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 TRHRP34981 398 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CA7P43166 264 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 HLCSP50747 726 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 LIM2P55344 173 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 RAB38P57729 211 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CAV1Q03135 178 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CHIT1Q13231 466 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 E2F2Q14209 437 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 C3AR1Q16581 482 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 MAPKAPK3Q16644 382 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PDK4Q16654 411 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 UBAP2Q5T6F2 1119 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 C16orf47Q6ZP98 133 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ZNF572Q7Z3I7 529 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CHERPQ8IWX8 916 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 OR2L5Q8NG80 312 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 STAG3L4Q8TBR4 150 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ADAMTS18Q8TE60 1221 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 THAP3Q8WTV1 239 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ITLN2Q8WWU7 325 aaPredicted RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 NXNL1Q96CM4 212 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PTCD3Q96EY7 689 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 SEC16BQ96JE7 1060 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 GPR137Q96N19 417 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 FRMD6Q96NE9 622 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ATOH8Q96SQ7 321 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CSF3RQ99062 836 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 DEFB126Q9BYW3 111 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 CNOT10Q9H9A5 744 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PRTFDC1Q9NRG1 225 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PNO1Q9NRX1 252 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 RNF112Q9ULX5 631 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 NPIPA1Q9UND3 350 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 PPIEQ9UNP9 301 aaKnown RBP13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ZNF835Q9Y2P0 537 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 LRBAP50851 2863 aa13.44□□□□□ -0.26
CDC42SE2-209ENST00000506419 ESYT3A0FGR9 886 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 TMEM200CA6NKL6 621 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 UBXN8O00124 270 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 CDK2AP1O14519 115 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 B3GALT2O43825 422 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 MTHFD2P13995 350 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 TFEBP19484 476 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 CERS1P27544 350 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 GSTM2P28161 218 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 CRABP2P29373 138 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 HSD17B7P56937 341 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 ALDH6A1Q02252 535 aaKnown RBP13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 IRF8Q02556 426 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 TBCCQ15814 346 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 KRTCAP3Q53RY4 240 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 ZNF793Q6ZN11 406 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 RAPH1Q70E73 1250 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 CLNKQ7Z7G1 428 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 FAM47BQ8NA70 645 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 ARMC2Q8NEN0 867 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 B3GNT7Q8NFL0 401 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 ZNF473Q8WTR7 871 aaKnown RBP13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 EXT2Q93063 718 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 CCDC120Q96HB5 630 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 SERINC2Q96SA4 455 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 LRRC1Q9BTT6 524 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 EFCAB11Q9BUY7 163 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 LIN28AQ9H9Z2 209 aaKnown RBP13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 ZDHHC18Q9NUE0 388 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 SH3BGRL2Q9UJC5 107 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 DAPP1Q9UN19 280 aa13.43□□□□□ -0.26
CDC42SE2-209ENST00000506419 TRBV11-1A0A0K0K1C0 115 aa13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 RTCAO00442 366 aaKnown RBP13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 ASNA1O43681 348 aa13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 NME2P1O60361 137 aa13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 SLC19A2O60779 497 aa13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 CTNSO60931 367 aa13.42□□□□□ -0.26
CDC42SE2-209ENST00000506419 SH3BGRLO75368 114 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms